RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 TCAF1Q9Y4C2 921 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 PDZK1P1A8MUH7 402 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 AKAP10O43572 662 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SSX5O60225 188 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 LPXNO60711 386 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SNAP29O95721 258 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CPNE6O95741 557 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 DLATP10515 647 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 IFI30P13284 250 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SOX9P48436 509 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 GTF2IP78347 998 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 MFSD13AQ14CX5 517 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ATF7IP2Q5U623 682 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ARHGEF16Q5VV41 709 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 DESI1Q6ICB0 168 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 HORMAD1Q86X24 394 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ZDHHC17Q8IUH5 632 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SPATA2LQ8IUW3 424 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CCDC36Q8IYA8 594 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 C1orf54Q8WWF1 131 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TESCQ96BS2 214 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CMTM5Q96DZ9 223 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SLC47A1Q96FL8 570 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 MAGED4Q96JG8 741 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 B3GALT6Q96L58 329 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 RIPOR3Q96MK2 946 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CSF3RQ99062 836 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TTYH2Q9BSA4 534 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ZC3H12CQ9C0D7 883 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 OR51B5Q9H339 312 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF112Q9UJU3 913 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 IGKV6-21A0A0C4DH24 114 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 FAM159BA6NKW6 160 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 KRT37O76014 449 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PIGNO95427 931 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PTTG1O95997 202 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 GOT2P00505 430 aaKnown RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PRKCBP05771 671 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 CLEC2LP0C7M8 214 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 ARP10275 920 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 KITP10721 976 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 RALAP11233 206 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 CYP2J2P51589 502 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 EFNA5P52803 228 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 CYP4F2P78329 520 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 RELQ04864 619 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 CYP4F3Q08477 520 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 MGAT3Q09327 533 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PDK2Q15119 407 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PGM5Q15124 567 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 NOMO1Q15155 1222 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF124Q15973 351 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 GRTP1Q5TC63 336 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 TLK2Q86UE8 772 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 CDH24Q86UP0 819 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 LYSMD2Q8IV50 215 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 TAGAPQ8N103 731 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 POC5Q8NA72 575 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 RAET1EQ8TD07 263 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 SYTL5Q8TDW5 730 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 GTF3C2Q8WUA4 911 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 TFAP2CQ92754 450 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 FAM111AQ96PZ2 611 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 EBF4Q9BQW3 602 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PORCNQ9H237 461 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 FBXO8Q9NRD0 319 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 TMEM45AQ9NWC5 275 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 KIF17Q9P2E2 1029 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 COPG2Q9UBF2 871 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 MARCOQ9UEW3 520 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 CYB5R1Q9UHQ9 305 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 KCNE2Q9Y6J6 123 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 OTOFQ9HC10 1997 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 KPNA5O15131 536 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 SEC14L2O76054 403 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 YES1P07947 543 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 POU2F1P14859 743 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 SPNP16150 400 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 MYF6P23409 242 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 GLRA2P23416 452 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 FMO4P31512 558 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 HTR7P34969 479 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF76P36508 570 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 DDOSTP39656 456 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 HSD17B7P56937 341 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 UBE3AQ05086 875 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 SPP2Q13103 211 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 HIF1AQ16665 826 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 TYSND1Q2T9J0 566 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 NHSL2Q5HYW2 709 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 TTC39BQ5VTQ0 682 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 TMEM65Q6PI78 240 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 ABHD15Q6UXT9 468 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 BNIPLQ7Z465 357 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 MRPL10Q7Z7H8 261 aaKnown RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 SLCO6A1Q86UG4 719 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 VSIG10LQ86VR7 867 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 LDHDQ86WU2 507 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 CRLF3Q8IUI8 442 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms