RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 RABIFP47224 123 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CDK18Q07002 472 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 SNX1Q13596 522 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 LRRC14Q15048 493 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CNGA3Q16281 694 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 P3H1Q32P28 736 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 FAM182AQ5T1J6 154 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 LIPIQ6XZB0 460 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 GCNT7Q6ZNI0 430 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 KDELC2Q7Z4H8 507 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 OXR1Q8N573 874 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 MINDY1Q8N5J2 469 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CCDC89Q8N998 374 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 FAM71DQ8N9W8 422 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 TMEM145Q8NBT3 493 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 IPMKQ8NFU5 416 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CCHCR1Q8TD31 782 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 NUS1Q96E22 293 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 MCCC1Q96RQ3 725 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 NAPGQ99747 312 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 C1QTNF2Q9BXJ5 285 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 GDF3Q9NR23 364 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 SNX12Q9UMY4 172 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CA5BQ9Y2D0 317 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PPIL1Q9Y3C6 166 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 SLCO1B1Q9Y6L6 691 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 DMDP11532 3685 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 LRP4O75096 1905 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 GPR179Q6PRD1 2367 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ZNF106Q9H2Y7 1883 aaKnown RBP11.02□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 C1orf232A0A0U1RR37 186 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 A0A1W2PR77 199 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CTAGE9A4FU28 777 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 C5orf60A6NFR6 353 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ANKRD66B4E2M5 251 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 H0Y8X5 98 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CES2O00748 559 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 TOR1BO14657 336 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 DFNA5O60443 496 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RECQL5O94762 991 aaPredicted RBP11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 HEXIM1O94992 359 aaKnown RBP11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 NDST3O95803 873 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 IFNB1P01574 187 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ITGAVP06756 1048 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 THEGLP0DJG4 465 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 HLA-DPA1P20036 260 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 STIP1P31948 543 aaKnown RBP11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 HNF1BP35680 557 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 IGFALSP35858 605 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 WNT3AP56704 352 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CLDN2P57739 230 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 FGL2Q14314 439 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 IRF4Q15306 451 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CCNG2Q16589 344 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 QPCTQ16769 361 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KIF19Q2TAC6 998 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 UAP1L1Q3KQV9 507 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 LRRC66Q68CR7 880 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 GSTA5Q7RTV2 222 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 DCP2Q8IU60 420 aaKnown RBP11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RASGEF1CQ8N431 466 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SRPK1Q96SB4 655 aaKnown RBP11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 GAREM1Q9H706 876 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 USP29Q9HBJ7 922 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SNX11Q9Y5W9 270 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 HS3ST3A1Q9Y663 406 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 VPS13AQ96RL7 3174 aa11.02□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 TLR4O00206 839 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 WNT9AO14904 365 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RAD51BO15315 384 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 YKT6O15498 198 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 GDF9O60383 454 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 GCATO75600 419 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PRLP01236 227 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SLC4A1P02730 911 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 WNT1P04628 370 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 FGF1P05230 155 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 LHCGRP22888 699 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 LMAN1P49257 510 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CCT8P50990 548 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 THOP1P52888 689 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 LIMK1P53667 647 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 GDF10P55107 478 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 NXPH1P58417 271 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PTK2BQ14289 1009 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 AGERQ15109 404 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SIX1Q15475 284 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 OASLQ15646 514 aaKnown RBP11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PARP6Q2NL67 630 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 STPG1Q5TH74 334 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CRTC1Q6UUV9 634 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KDELC1Q6UW63 502 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 Q6ZSR6 202 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ABI3BPQ7Z7G0 1075 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 TSPAN33Q86UF1 283 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SLC25A41Q8N5S1 370 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 TP53I13Q8NBR0 393 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 OR13H1Q8NG92 308 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 TADA1Q96BN2 335 aa11.01□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 DTD2Q96FN9 168 aa11.01□□□□□ -0.65
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