RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 CDRT15Q96T59 188 aa7.24□□□□□ -1.25
RGPD3-201ENST00000304514 FAM192AQ9GZU8 254 aa7.24□□□□□ -1.25
RGPD3-201ENST00000304514 SP110Q9HB58 689 aa7.24□□□□□ -1.25
RGPD3-201ENST00000304514 OLA1Q9NTK5 396 aaKnown RBP7.24□□□□□ -1.25
RGPD3-201ENST00000304514 NLE1Q9NVX2 485 aaPredicted RBP7.24□□□□□ -1.25
RGPD3-201ENST00000304514 TMEM181Q9P2C4 612 aa7.24□□□□□ -1.25
RGPD3-201ENST00000304514 OR51F1A6NGY5 319 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 TBX18O95935 607 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 CCDC166P0CW27 439 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 FOLH1Q04609 750 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 GPNMBQ14956 572 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 TLR1Q15399 786 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ACBD5Q5T8D3 534 aaPredicted RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 AGAP9Q5VTM2 703 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 RAP1GAP2Q684P5 730 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 RNF19BQ6ZMZ0 732 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ATP6V0D2Q8N8Y2 350 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ASB9Q96DX5 294 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 RAB26Q9ULW5 256 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 NOD1Q9Y239 953 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 AHCYL1O43865 530 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ALDOCP09972 364 aaKnown RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ACVRL1P37023 503 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 FAM83EQ2M2I3 478 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 USP13Q92995 863 aaPredicted RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 SERPINI1Q99574 410 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 UBAP1Q9NZ09 502 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 PCDHGB4Q9UN71 923 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 MED16Q9Y2X0 877 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 PCDHB5Q9Y5E4 795 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 PCDHGB5Q9Y5G0 923 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ST14Q9Y5Y6 855 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ATF6P18850 670 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 GPX3P22352 226 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 RING1Q06587 406 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 SREBF2Q12772 1141 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 GPR158Q5T848 1215 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 MARC1Q5VT66 337 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 LDB1Q86U70 411 aaPredicted RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 PQLC1Q8N2U9 271 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 OR52K2Q8NGK3 314 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 CCDC124Q96CT7 223 aaKnown RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 C3orf30Q96M34 536 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 PRICKLE1Q96MT3 831 aaPredicted RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 UHRF1Q96T88 793 aaPredicted RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 MGME1Q9BQP7 344 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ZBED2Q9BTP6 218 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 CACNA2D2Q9NY47 1150 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 PACSIN3Q9UKS6 424 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 CCL22O00626 93 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 KLK8O60259 260 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 RBP1P09455 135 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 EFEMP1Q12805 493 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ILF2Q12905 390 aaKnown RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 GPR162Q16538 588 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 MAP3K21Q5TCX8 1036 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ZFP1Q6P2D0 407 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 SLC24A5Q71RS6 500 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 PTAR1Q7Z6K3 402 aaPredicted RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 DLG3Q92796 817 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ZNF599Q96NL3 588 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 GPATCH1Q9BRR8 931 aaKnown RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 SLC2A11Q9BYW1 496 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 YIPF3Q9GZM5 350 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 VWA7Q9Y334 891 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 ACTL7AQ9Y615 435 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 TRIM38O00635 465 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 CA12O43570 354 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 RPP40O75818 363 aaKnown RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 RTN3O95197 1032 aaPredicted RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 VCLP18206 1134 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 FLT3LGP49771 235 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 BTG3Q14201 252 aaPredicted RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 GALNT3Q14435 633 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 HMBOX1Q6NT76 420 aa7.23□□□□□ -1.25
RGPD3-201ENST00000304514 DDX50Q9BQ39 737 aaKnown RBP7.23□□□□□ -1.25
RGPD3-201ENST00000304514 MTMR11A4FU01 709 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 SGSHP51688 502 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 CLCN2P51788 898 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 PKNOX1P55347 436 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 TRAP1Q12931 704 aaKnown RBP7.22□□□□□ -1.25
RGPD3-201ENST00000304514 SCN4BQ8IWT1 228 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 MDGA1Q8NFP4 955 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 BCL7CQ8WUZ0 217 aaPredicted RBP7.22□□□□□ -1.25
RGPD3-201ENST00000304514 B3GALT6Q96L58 329 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 PKP2Q99959 881 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 UXTQ9UBK9 157 aaPredicted RBP7.22□□□□□ -1.25
RGPD3-201ENST00000304514 PLXNA2O75051 1894 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 TCRBV3S1A0A5B6 114 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 H3BMM5 538 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 CD3EAPO15446 510 aaKnown RBP7.22□□□□□ -1.25
RGPD3-201ENST00000304514 MYCNP04198 464 aaPredicted RBP7.22□□□□□ -1.25
RGPD3-201ENST00000304514 FLOT2Q14254 428 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 PTPRCAPQ14761 206 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 POLD3Q15054 466 aaPredicted RBP7.22□□□□□ -1.25
RGPD3-201ENST00000304514 PDK3Q15120 406 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 SDCCAG8Q86SQ7 713 aaPredicted RBP7.22□□□□□ -1.25
RGPD3-201ENST00000304514 RHEBL1Q8TAI7 183 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 SGF29Q96ES7 293 aa7.22□□□□□ -1.25
RGPD3-201ENST00000304514 TTLL2Q9BWV7 592 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms