RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 CCDC142Q17RM4 750 aa5.89□□□□□ -1.47
ZNF440-201ENST00000304060 C11orf57Q6ZUT1 292 aaPredicted RBP5.89□□□□□ -1.47
ZNF440-201ENST00000304060 TMEM139Q8IV31 216 aa5.89□□□□□ -1.47
ZNF440-201ENST00000304060 SH2D3CQ8N5H7 860 aa5.89□□□□□ -1.47
ZNF440-201ENST00000304060 TMEM35BQ8NCS4 154 aa5.89□□□□□ -1.47
ZNF440-201ENST00000304060 FAM129BQ96TA1 746 aa5.89□□□□□ -1.47
ZNF440-201ENST00000304060 TMUB1Q9BVT8 246 aa5.89□□□□□ -1.47
ZNF440-201ENST00000304060 TWSG1Q9GZX9 223 aa5.89□□□□□ -1.47
ZNF440-201ENST00000304060 CD93Q9NPY3 652 aa5.89□□□□□ -1.47
ZNF440-201ENST00000304060 RNF215Q9Y6U7 377 aa5.89□□□□□ -1.47
ZNF440-201ENST00000304060 NUDT21O43809 227 aaKnown RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 SEC31AO94979 1220 aaKnown RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 LINGO3P0C6S8 592 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 COX6B1P14854 86 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 NAT1P18440 290 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 EPHB1P54762 984 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 RNASE9P60153 205 aaKnown RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 FOXM1Q08050 763 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 GTF2H3Q13889 308 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 KYNUQ16719 465 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 FBXW10Q5XX13 1052 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 GDF7Q7Z4P5 450 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 SLC9B2Q86UD5 537 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 ZC3H18Q86VM9 953 aaKnown RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 TRIM42Q8IWZ5 723 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 SLC35F3Q8IY50 421 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 PCDH19Q8TAB3 1148 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 ART4Q93070 314 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 FOXP3Q9BZS1 431 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 TRIM5Q9C035 493 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 TTYH3Q9C0H2 523 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 CLPBQ9H078 707 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 WDR26Q9H7D7 661 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 RAD18Q9NS91 495 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 VANGL2Q9ULK5 521 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 SLC5A6Q9Y289 635 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 SPTBN1Q01082 2364 aaKnown RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 PLXND1Q9Y4D7 1925 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 CXorf51AA0A1B0GTR3 108 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 C5orf60A6NFR6 353 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 SOWAHDA6NJG2 315 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 RAMP2O60895 175 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 E2F6O75461 281 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 F13A1P00488 732 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 TGM2P21980 687 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 SULT1E1P49888 294 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 HK3P52790 923 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 ZXDBP98169 803 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 KCNJ12Q14500 433 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 C6orf15Q6UXA7 325 aaPredicted RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 GDPD4Q6W3E5 623 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 BZW1Q7L1Q6 419 aaKnown RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 MAATS1Q7Z4T9 603 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 PLPP6Q8IY26 295 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 AADATQ8N5Z0 425 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 EXD3Q8N9H8 876 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 RBBP8NLQ8NC74 664 aaPredicted RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 STARD8Q92502 1023 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 BOCQ9BWV1 1114 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 ZYG11BQ9C0D3 744 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 EPN3Q9H201 632 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 ATP13A3Q9H7F0 1226 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 FZD3Q9NPG1 666 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 LATS2Q9NRM7 1088 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 TRMT1Q9NXH9 659 aaKnown RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 LNPEPQ9UIQ6 1025 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 DOPEY2Q9Y3R5 2298 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 CFAP69A5D8W1 941 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 PPP1R3GB7ZBB8 358 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 YY2O15391 372 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 ITGAXP20702 1163 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 CTNNA2P26232 953 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 HALP42357 657 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 MAPKAPK2P49137 400 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 CACNA2D1P54289 1103 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 MYBPC3Q14896 1274 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 ACOX1Q15067 660 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 BCL2A1Q16548 175 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 TDRD12Q587J7 1177 aaKnown RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 SNAP47Q5SQN1 464 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 BRAT1Q6PJG6 821 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 TAOK1Q7L7X3 1001 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 ZNF572Q7Z3I7 529 aaPredicted RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 TRIM58Q8NG06 486 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 TAS1R2Q8TE23 839 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 JPH3Q8WXH2 748 aaPredicted RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 ISG20Q96AZ6 181 aaKnown RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 FEM1AQ9BSK4 669 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 STRA6Q9BX79 667 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 C1QTNF2Q9BXJ5 285 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 MAGEH1Q9H213 219 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 GOLPH3LQ9H4A5 285 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 CHST11Q9NPF2 352 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 UCKL1Q9NWZ5 548 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 FBXO2Q9UK22 296 aaPredicted RBP5.88□□□□□ -1.47
ZNF440-201ENST00000304060 PADI1Q9ULC6 663 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 HS3ST2Q9Y278 367 aa5.88□□□□□ -1.47
ZNF440-201ENST00000304060 TBC1D30Q9Y2I9 924 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms