RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 C2P06681 752 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 TCEA2Q15560 299 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 BSNDQ8WZ55 320 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 A8MUI8 341 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 GSC2O15499 205 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 BRCC3P46736 316 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 PERM1Q5SV97 790 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 LCLAT1Q6UWP7 414 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 ITCHQ96J02 903 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 Q96MT0 163 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 IGFLR1Q9H665 355 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 ASAH2Q9NR71 780 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 CRNNQ9UBG3 495 aaPredicted RBP13.97□□□□□ -0.17
PRKCB-201ENST00000303531 PCDHB9Q9Y5E1 797 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 TRAFD1O14545 582 aaPredicted RBP13.97□□□□□ -0.17
PRKCB-201ENST00000303531 CAPN1P07384 714 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 TPSB2P20231 275 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 COPZ1P61923 177 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 SPIBQ01892 262 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 TPSAB1Q15661 275 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 MZT2AQ6P582 158 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 DEPDC4Q8N2C3 294 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 CSGALNACT1Q8TDX6 532 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 SLC47A1Q96FL8 570 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 COQ7Q99807 217 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 CLK4Q9HAZ1 481 aaKnown RBP13.97□□□□□ -0.17
PRKCB-201ENST00000303531 DERAQ9Y315 318 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 CNTNAP1P78357 1384 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 NR2F1P10589 423 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 RPL3P39023 403 aaKnown RBP13.97□□□□□ -0.17
PRKCB-201ENST00000303531 THOP1P52888 689 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 BIKQ13323 160 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 MTX3Q5HYI7 312 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 LPCAT4Q643R3 524 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 SH3BP5LQ7L8J4 393 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 PROSER1Q86XN7 944 aa13.97□□□□□ -0.17
PRKCB-201ENST00000303531 SLC9A3R1O14745 358 aaPredicted RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 MSI1O43347 362 aaKnown RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 MFSD11O43934 449 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 C4BPAP04003 597 aaKnown RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 DMPKQ09013 629 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 DLG2Q15700 870 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 RNF44Q7L0R7 432 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 FAM13CQ8NE31 585 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 CPT1BQ92523 772 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 AHCYL2Q96HN2 611 aaKnown RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 KCTD15Q96SI1 283 aaPredicted RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 GOLGA2P5Q9HBQ8 144 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 ABCB10Q9NRK6 738 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 FAM105AQ9NUU6 356 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 EFR3BQ9Y2G0 817 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 A0A0J9YYE9 177 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 HLA-DQA2P01906 255 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 SRP54P61011 504 aaKnown RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 MOSPD2Q8NHP6 518 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 CILPO75339 1184 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 ETS2P15036 469 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 TPP2P29144 1249 aaPredicted RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 SMAD3P84022 425 aaKnown RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 PAGE2Q7Z2X7 111 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 ZNF655Q8N720 491 aaPredicted RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 SPATA5L1Q9BVQ7 753 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 NPEPPSL1A6NEC2 478 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 LRCH4O75427 683 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 WARSP23381 471 aaKnown RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 JAK1P23458 1154 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 FASTKD3Q14CZ7 662 aaKnown RBP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 TEX44Q53QW1 395 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 TREML2Q5T2D2 321 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 COLGALT2Q8IYK4 626 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 RBFAQ8N0V3 343 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 PQLC1Q8N2U9 271 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 PARP8Q8N3A8 854 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 ZHX1-C8orf76Q96EF9 292 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.96□□□□□ -0.17
PRKCB-201ENST00000303531 ERGIC3Q9Y282 383 aa13.96□□□□□ -0.17
PRKCB-201ENST00000303531 NRP2O60462 931 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 PAX3P23760 479 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 CDKN2BP42772 138 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 JAM2P57087 298 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 FSTL1Q12841 308 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 MAP2K5Q13163 448 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 OTOP3Q7RTS5 596 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 SPACA7Q96KW9 195 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 ZFYVE1Q9HBF4 777 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 SALL4Q9UJQ4 1053 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 MYPNQ86TC9 1320 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.96□□□□□ -0.18
PRKCB-201ENST00000303531 FOXO6A8MYZ6 492 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 CST3P01034 146 aaPredicted RBP13.96□□□□□ -0.18
PRKCB-201ENST00000303531 ADRA1BP35368 520 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 GBE1Q04446 702 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 KLF10Q13118 480 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 C16orf62Q7Z3J2 963 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 ACSS2Q9NR19 701 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 OGDHLQ9ULD0 1010 aa13.96□□□□□ -0.18
PRKCB-201ENST00000303531 QSOX1O00391 747 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 USP41Q3LFD5 358 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 MZT2BQ6NZ67 158 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 MON1AQ86VX9 555 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms