RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SUPT3HB4E1H0 165 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 SUPT3HO75486 399 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 MAPKAPK2P49137 400 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 OXCT1P55809 520 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 FAM156AQ8NDB6 213 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 OR13C4Q8NGS5 318 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 PPWD1Q96BP3 646 aaKnown RBP13.64□□□□□ -0.23
CDH8-201ENST00000299345 EXOC2Q96KP1 924 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 GPR62Q9BZJ7 368 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 H7C4K7 107 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 MRASO14807 208 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 RPP40O75818 363 aaKnown RBP13.64□□□□□ -0.23
CDH8-201ENST00000299345 SRP72O76094 671 aaKnown RBP13.64□□□□□ -0.23
CDH8-201ENST00000299345 SNRPB2P08579 225 aaKnown RBP13.64□□□□□ -0.23
CDH8-201ENST00000299345 CD1EP15812 388 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 IMPDH1P20839 514 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 KCNQ1P51787 676 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 CDKN2DP55273 166 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 NME5P56597 212 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 CEACAM7Q14002 265 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 EFHBQ8N7U6 833 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 OR7D4Q8NG98 312 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 DLG3Q92796 817 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 FEM1CQ96JP0 617 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 TUBGCP5Q96RT8 1024 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 SLC25A23Q9BV35 468 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 TMEM161AQ9NX61 479 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 FAM50BQ9Y247 325 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 ZNF236Q9UL36 1845 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 TMEM189-UBE2V1I3L0A0 370 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 TRIM38O00635 465 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 PEX11BO96011 259 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 HSPA8P11142 646 aaKnown RBP13.63□□□□□ -0.23
CDH8-201ENST00000299345 ATP5C1P36542 298 aaKnown RBP13.63□□□□□ -0.23
CDH8-201ENST00000299345 FAM26DQ5JW98 314 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 ACBD5Q5T8D3 534 aaPredicted RBP13.63□□□□□ -0.23
CDH8-201ENST00000299345 ARMC3Q5W041 872 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 SNX31Q8N9S9 440 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 RAET1EQ8TD07 263 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 BRSK1Q8TDC3 778 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 EFHD1Q9BUP0 239 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 SYTL2Q9HCH5 934 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 UBA2Q9UBT2 640 aaPredicted RBP13.63□□□□□ -0.23
CDH8-201ENST00000299345 NSUN2Q08J23 767 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDH8-201ENST00000299345 ELAVL2Q12926 359 aaKnown RBP13.63□□□□□ -0.23
CDH8-201ENST00000299345 CLYBLQ8N0X4 340 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 PCYOX1LQ8NBM8 494 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 ARRDC2Q8TBH0 407 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 PIP4K2CQ8TBX8 421 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 ZIC5Q96T25 663 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 RNF112Q9ULX5 631 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 TLL2Q9Y6L7 1015 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.63□□□□□ -0.23
CDH8-201ENST00000299345 MTMR11A4FU01 709 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 CBX4O00257 560 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 NDST3O95803 873 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 ALDH1A1P00352 501 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 FMO4P31512 558 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 FOLH1Q04609 750 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 ILF2Q12905 390 aaKnown RBP13.63□□□□□ -0.23
CDH8-201ENST00000299345 ZNF177Q13360 481 aaPredicted RBP13.63□□□□□ -0.23
CDH8-201ENST00000299345 EME1Q96AY2 570 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 TUBGCP3Q96CW5 907 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 IL1RL2Q9HB29 575 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 TAS2R13Q9NYV9 303 aa13.63□□□□□ -0.23
CDH8-201ENST00000299345 C2orf81A6NN90 581 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 PRAMEF11O60813 436 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 MTA1Q13330 715 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 PDK3Q15120 406 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 PPP1R3AQ16821 1122 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 ZNF423Q2M1K9 1284 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 PIGGQ5H8A4 983 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 FUT10Q6P4F1 479 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 GLT6D1Q7Z4J2 308 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 ATP13A1Q9HD20 1204 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 DNMT3LQ9UJW3 386 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 CROTQ9UKG9 612 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 SCN10AQ9Y5Y9 1956 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 TCAF2A6NFQ2 919 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 LDB2O43679 373 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 IGHA2P01877 340 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 RHOCP08134 193 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 HOXD10P28358 340 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 SLC26A3P40879 764 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 CSRP3P50461 194 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 C1QTNF8P60827 252 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 SP3Q02447 781 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 GNA12Q03113 381 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 GPR17Q13304 367 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 TRIM71Q2Q1W2 868 aaKnown RBP13.62□□□□□ -0.23
CDH8-201ENST00000299345 PGBD5Q8N414 524 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 UBXN10Q96LJ8 280 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 SARS2Q9NP81 518 aaKnown RBP13.62□□□□□ -0.23
CDH8-201ENST00000299345 SCUBE2Q9NQ36 999 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 CCDC160A6NGH7 325 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 KIF3CO14782 793 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 RNASEH1O60930 286 aaKnown RBP13.62□□□□□ -0.23
CDH8-201ENST00000299345 GJB3O75712 270 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 PYGLP06737 847 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 MMP2P08253 660 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms