RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 LRIT1Q9P2V4 623 aa16.04■□□□□ 0.16
TMEM41A-201ENST00000296254 AP4E1Q9UPM8 1137 aa16.04■□□□□ 0.16
TMEM41A-201ENST00000296254 PCDHGA4Q9Y5G9 962 aa16.04■□□□□ 0.16
TMEM41A-201ENST00000296254 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
TMEM41A-201ENST00000296254 EIF3CLB5ME19 914 aaKnown RBP16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 PALMO75781 387 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 DESP17661 470 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 BCL2L1Q07817 233 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 ARHGEF7Q14155 803 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 MAP9Q49MG5 647 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 MANEAQ5SRI9 462 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 DCUN1D2Q6PH85 259 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 VASH2Q86V25 355 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 DTX1Q86Y01 620 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 PELI3Q8N2H9 469 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 CCL4L1Q8NHW4 92 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 EIF3CQ99613 913 aaKnown RBP16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 CINPQ9BW66 212 aaPredicted RBP16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 LGR4Q9BXB1 951 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 FAM117AQ9C073 453 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 DPEP2Q9H4A9 486 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 CYP4F12Q9HCS2 524 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 STARD5Q9NSY2 213 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 GPATCH2LQ9NWQ4 482 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 HEMK1Q9Y5R4 338 aaPredicted RBP16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 NAV2Q8IVL1 2488 aa16.03■□□□□ 0.16
TMEM41A-201ENST00000296254 A0A1W2PQC6 194 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 PRSS38A1L453 326 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 LGALS16A8MUM7 142 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 C9orf172C9J069 976 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 AGRPO00253 132 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 EEF2KO00418 725 aaKnown RBP16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 TRAFD1O14545 582 aaPredicted RBP16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 CD82P27701 267 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 CSRP3P50461 194 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 RFTN1Q14699 578 aaPredicted RBP16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 C16orf72Q14CZ0 275 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 CA9Q16790 459 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 TSR1Q2NL82 804 aaKnown RBP16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 PHF19Q5T6S3 580 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 RFX8Q6ZV50 586 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 ZNF438Q7Z4V0 828 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 ZFAND4Q86XD8 727 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 ARHGAP12Q8IWW6 846 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 NPWQ8N729 165 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 NEK11Q8NG66 645 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 KIAA1524Q8TCG1 905 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 SPOCK2Q92563 424 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 USP7Q93009 1102 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 AGPAT1Q99943 283 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 ARHGAP9Q9BRR9 750 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 SEMA6CQ9H3T2 930 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 SP110Q9HB58 689 aa16.02■□□□□ 0.16
TMEM41A-201ENST00000296254 PTPN13Q12923 2485 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 CYSRT1A8MQ03 144 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 PDE2AO00408 941 aaPredicted RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 TERTO14746 1132 aaKnown RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 CPNE6O95741 557 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 FAM87AP0C7U9 286 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 MYCLP1P12525 358 aaPredicted RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 ITGB6P18564 788 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 WT1P19544 449 aaPredicted RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 COPB1P53618 953 aaKnown RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 MAPK10P53779 464 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 MAZP56270 477 aaKnown RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 AP1S1P61966 158 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 POLR2LP62875 67 aaKnown RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 B4GALNT1Q00973 533 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 NSUN2Q08J23 767 aaKnown RBP eCLIP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 NR1D2Q14995 579 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 PNCKQ6P2M8 343 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 ARHGAP36Q6ZRI8 547 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 C17orf82Q86X59 251 aaPredicted RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 MCOLN2Q8IZK6 566 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 PAF1Q8N7H5 531 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 NSMCE3Q96MG7 304 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 PCMTD1Q96MG8 357 aaPredicted RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 PSKH2Q96QS6 385 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 PEBP4Q96S96 227 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 SNRNP25Q9BV90 132 aaKnown RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 TRIM4Q9C037 500 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 B3GNT4Q9C0J1 378 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 DHX35Q9H5Z1 703 aaKnown RBP16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 RDH14Q9HBH5 336 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 B4GALT6Q9UBX8 382 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 PCDHB11Q9Y5F2 797 aa16.01■□□□□ 0.15
TMEM41A-201ENST00000296254 RELNP78509 3460 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 ARHGEF17Q96PE2 2063 aaPredicted RBP16■□□□□ 0.15
TMEM41A-201ENST00000296254 DFFAO00273 331 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 ARHGAP6O43182 974 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 CCNB1P14635 433 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 ERCC2P18074 760 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 PSMA2P25787 234 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 IL10RBQ08334 325 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 MAMLD1Q13495 774 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 ACOX1Q15067 660 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 ACAD10Q6JQN1 1059 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 HEATR4Q86WZ0 1026 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 GPBAR1Q8TDU6 330 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms