RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CHRNB1P11230 501 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 HOXB2P14652 356 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 TIMP2P16035 220 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 GCAP28676 217 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 FRG1Q14331 258 aaKnown RBP18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 POM121L1PQ3SYA9 428 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 TSTD2Q5T7W7 516 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 FAM46CQ5VWP2 391 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 PEX13Q92968 403 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 ERLEC1Q96DZ1 483 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 PGM2Q96G03 612 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 CCDC77Q9BR77 488 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 EURLQ9NYK6 297 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 MOCS1Q9NZB8 636 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 RIMKLBQ9ULI2 386 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 BPTFQ12830 3046 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 A0A1W2PQF6 199 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 KANSL1LA0AUZ9 987 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 CCDC78A2IDD5 438 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 C2orf81A6NN90 581 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 NFKBIAP25963 317 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 STX2P32856 288 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 SLCO1A2P46721 670 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 PDE1BQ01064 536 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 EOGTQ5NDL2 527 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 KIAA1211LQ6NV74 962 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 ESRP1Q6NXG1 681 aaKnown RBP18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 TTC7BQ86TV6 843 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 SIX5Q8N196 739 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 SYNPOQ8N3V7 929 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 OR2T3Q8NH03 318 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 ATP6V1G3Q96LB4 118 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 FBRSQ9HAH7 460 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 SLC2A6Q9UGQ3 507 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 ZNF711Q9Y462 761 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 KCTD3Q9Y597 815 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 EXOC1LA0A1B0GW35 172 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 TLDC2A0PJX2 215 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 SMIM23A6NLE4 172 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 UPK3BL1B0FP48 263 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 UPK3BL2E5RIL1 263 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 IVLP07476 585 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 TARSP26639 723 aaKnown RBP18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 METAP1P53582 386 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 COPAP53621 1224 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 SATB1Q01826 763 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 CNGA3Q16281 694 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 CDKN3Q16667 212 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 SKIDA1Q1XH10 827 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 TNFAIP8L3Q5GJ75 292 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 AGBL2Q5U5Z8 902 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 TRMT10BQ6PF06 316 aaKnown RBP18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 PARS2Q7L3T8 475 aaKnown RBP18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 TTC30BQ8N4P2 665 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 STYXQ8WUJ0 223 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 ARRDC3Q96B67 414 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 NELL2Q99435 816 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 CENPHQ9H3R5 247 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 CD248Q9HCU0 757 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 LTB4R2Q9NPC1 389 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 CD320Q9NPF0 282 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 FETUBQ9UGM5 382 aa18.95■□□□□ 0.62
PDLIM3-202ENST00000284770 NPIPB15A6NHN6 443 aaPredicted RBP18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 PAMP19021 973 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 LPOP22079 712 aaPredicted RBP18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 XPAP23025 273 aaPredicted RBP18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 HMGCLP35914 325 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 PSMD8P48556 350 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 ACVR1Q04771 509 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 LRRC32Q14392 662 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 CST6Q15828 149 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 KCTD16Q68DU8 428 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 TDRPQ86YL5 185 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 UNC5BQ8IZJ1 945 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 OR13J1Q8NGT2 312 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 CYTH2Q99418 400 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 GPR63Q9BZJ6 419 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 LMAN1LQ9HAT1 526 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 ZFYVE1Q9HBF4 777 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 DYRK4Q9NR20 520 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 MUTYHQ9UIF7 546 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 MMP17Q9ULZ9 603 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 MTF2Q9Y483 593 aaPredicted RBP18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 CKAP5Q14008 2032 aa18.94■□□□□ 0.62
PDLIM3-202ENST00000284770 A0A0U1RQS6 177 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 C1orf232A0A0U1RR37 186 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 HMGB1P1B2RPK0 211 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 BUD23O43709 281 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 ADH1BP00325 375 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 COL9A1P20849 921 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 ZNF140P52738 457 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 EFTUD2Q15029 972 aaKnown RBP eCLIP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 LRRC73Q5JTD7 316 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 ZNF776Q68DI1 518 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 KIAA0930Q6ICG6 404 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 ZNF449Q6P9G9 518 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 FBXL19Q6PCT2 694 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 CRTC1Q6UUV9 634 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 LYSMD3Q7Z3D4 306 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms