RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 NFKB1P19838 968 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 LMO2P25791 158 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 OXTRP30559 389 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 ADSLP30566 484 aaPredicted RBP11.4□□□□□ -0.58
SCLT1-201ENST00000281142 HOXC8P31273 242 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 BMXP51813 675 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 ADAM17P78536 824 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 ZNF618Q5T7W0 954 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 THOC7Q6I9Y2 204 aaKnown RBP11.4□□□□□ -0.58
SCLT1-201ENST00000281142 SLC26A9Q7LBE3 791 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 DHFR2Q86XF0 187 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 NPWQ8N729 165 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 TCF12Q99081 682 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 UTP6Q9NYH9 597 aaKnown RBP11.4□□□□□ -0.58
SCLT1-201ENST00000281142 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.4□□□□□ -0.581e-6■■■■□ 24
SCLT1-201ENST00000281142 GTF2IRD1Q9UHL9 959 aa11.4□□□□□ -0.58
SCLT1-201ENST00000281142 I6L893 689 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 CHRM3P20309 590 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 POLR2IP36954 125 aaKnown RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 MLLT10P55197 1068 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 RBP5P82980 135 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 PLCL1Q15111 1095 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 TBCELQ5QJ74 424 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 CLEC6AQ6EIG7 209 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 ERMP1Q7Z2K6 904 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 FAM35AQ86V20 835 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 ZC3H7AQ8IWR0 971 aaKnown RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 ANKFN1Q8N957 763 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 USP33Q8TEY7 942 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 CASP10Q92851 521 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 TSNARE1Q96NA8 513 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 GPATCH1Q9BRR8 931 aaKnown RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 MTF2Q9Y483 593 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 TRIM64CA6NLI5 447 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 UBDO15205 165 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 TREHO43280 583 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 VTNP04004 478 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 PSMD8P48556 350 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 CSE1LP55060 971 aaKnown RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 POU5F1BQ06416 359 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 MERTKQ12866 999 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 LDLRAP1Q5SW96 308 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 SYPL2Q5VXT5 272 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 ANKRD26P1Q6NSI1 321 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 C16orf87Q6PH81 154 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 DCLRE1AQ6PJP8 1040 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 SLC15A4Q8N697 577 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 HEXDCQ8WVB3 486 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 BORCS5Q969J3 196 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 PBXIP1Q96AQ6 731 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 DHRS1Q96LJ7 313 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 GLT1D1Q96MS3 346 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 TMEM181Q9P2C4 612 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 CROTQ9UKG9 612 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 CDH7Q9ULB5 785 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 OAZ3Q9UMX2 235 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 PTGDR2Q9Y5Y4 395 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 CITO14578 2027 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 C17orf102A2RUQ5 167 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 SRP72O76094 671 aaKnown RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 KCNH1O95259 989 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 NCAM1P13591 858 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 NDUFV1P49821 464 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 TRAF2Q12933 501 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 SLC12A1Q13621 1099 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 CAPRIN1Q14444 709 aaKnown RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 PRPSAP1Q14558 356 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 CYP2A13Q16696 494 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 ZNF829Q3KNS6 432 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 KCTD11Q693B1 232 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 GDF6Q6KF10 455 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 KCTD8Q6ZWB6 473 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 OTOP3Q7RTS5 596 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 LINC01465Q8N7H1 131 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 SCAIQ8N9R8 606 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 ANKRD52Q8NB46 1076 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 OR2T34Q8NGX1 318 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 OR2T3Q8NH03 318 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 C18orf25Q96B23 403 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 ZMAT2Q96NC0 199 aaKnown RBP11.39□□□□□ -0.59
SCLT1-201ENST00000281142 RHOJQ9H4E5 214 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 SLC2A6Q9UGQ3 507 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 MID2Q9UJV3 735 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 ACOT9Q9Y305 439 aa11.39□□□□□ -0.59
SCLT1-201ENST00000281142 RNF103-CHMP3A0A140T963 221 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 MBLAC1A4D2B0 266 aaPredicted RBP11.38□□□□□ -0.59
SCLT1-201ENST00000281142 SLCO1B7G3V0H7 640 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 NME4O00746 187 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 APOA4P06727 396 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 SNRPB2P08579 225 aaKnown RBP11.38□□□□□ -0.59
SCLT1-201ENST00000281142 BMP2P12643 396 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 ERCC2P18074 760 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 MYF6P23409 242 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 EIF2B2P49770 351 aaKnown RBP11.38□□□□□ -0.59
SCLT1-201ENST00000281142 TAS2R39P59534 338 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 STX5Q13190 355 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 C6orf183Q5T699 404 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 CYHR1Q6ZMK1 362 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 HFE2Q6ZVN8 426 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 FUNDC1Q8IVP5 155 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms