RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 CATSPEREQ5SY80 951 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 SLFN12LQ6IEE8 588 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 PMF1Q6P1K2 205 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 ACOT1Q86TX2 421 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 OR7A2PQ8NGA2 310 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 OR13F1Q8NGS4 319 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 HDAC11Q96DB2 347 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 OLFM1Q99784 485 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 CTRCQ99895 268 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 PRDM12Q9H4Q4 367 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 PARVBQ9HBI1 364 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 PRELID1Q9Y255 219 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 A0A0A0MRY4 1105 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 UNCXA6NJT0 531 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 C19orf81C9J6K1 198 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 ANGPT2O15123 496 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SBK3P0C264 359 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 PRKACGP22612 351 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 MAGEA3P43357 314 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
HERC6-202ENST00000273960 NCS1P62166 190 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 ECT2LQ008S8 904 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 TRIM32Q13049 653 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 ACAP2Q15057 778 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 PYCR3Q53H96 274 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 BOLA3Q53S33 107 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 COLEC12Q5KU26 742 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 CATSPERGQ6ZRH7 1159 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 PRR23CQ6ZRP0 262 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 CATSPER4Q7RTX7 472 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 ANKFN1Q8N957 763 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SPPL2BQ8TCT7 592 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 CDHR1Q96JP9 859 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SPATA13Q96N96 652 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 TSPAN18Q96SJ8 248 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SEZ6LQ9BYH1 1024 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 C6orf62Q9GZU0 229 aaPredicted RBP12.86□□□□□ -0.35
HERC6-202ENST00000273960 BTRCQ9Y297 605 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SLC30A1Q9Y6M5 507 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 TRIM24O15164 1050 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 IDH3BO43837 385 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 NFICP08651 508 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 CDH1P12830 882 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 ADORA2BP29275 332 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 MAP2K4P45985 399 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SLC12A2P55011 1212 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 GOLGA7BQ2TAP0 167 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 XKR3Q5GH77 459 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 CCNYL2Q5T2Q4 361 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 ZYG11AQ6WRX3 759 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 RFPL4BQ6ZWI9 263 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 ZNF354CQ86Y25 554 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 CEP97Q8IW35 865 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 OR10Q1Q8NGQ4 319 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 CENPNQ96H22 339 aaPredicted RBP12.86□□□□□ -0.35
HERC6-202ENST00000273960 CSPG4P5Q96PW8 444 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 NEK6Q9HC98 313 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SCHIP1Q9P0W5 487 aaPredicted RBP12.86□□□□□ -0.35
HERC6-202ENST00000273960 CNTN6Q9UQ52 1028 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 INVSQ9Y283 1065 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SNX5Q9Y5X3 404 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 PPP6CO00743 305 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 RGS20O76081 388 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SEC24AO95486 1093 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 BMP2P12643 396 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SPNP16150 400 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 TPSB2P20231 275 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 GPD2P43304 727 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 NDST1P52848 882 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 RABGGTBP53611 331 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 TPSAB1Q15661 275 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 ZNF567Q8N184 647 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 RAB2BQ8WUD1 216 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 TMEM176AQ96HP8 235 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 SPATA33Q96N06 139 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 KCTD15Q96SI1 283 aaPredicted RBP12.86□□□□□ -0.35
HERC6-202ENST00000273960 C17orf80Q9BSJ5 609 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 PRRG3Q9BZD7 231 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 COQ3Q9NZJ6 369 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 HACD3Q9P035 362 aa12.86□□□□□ -0.35
HERC6-202ENST00000273960 MTF2Q9Y483 593 aaPredicted RBP12.86□□□□□ -0.35
HERC6-202ENST00000273960 ARPC2O15144 300 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 RAD51BO15315 384 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 DEAF1O75398 565 aaPredicted RBP12.85□□□□□ -0.35
HERC6-202ENST00000273960 DAB1O75553 588 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 GCATO75600 419 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 ATG7O95352 703 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 KRT8P05787 483 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 MBL2P11226 248 aaPredicted RBP12.85□□□□□ -0.35
HERC6-202ENST00000273960 TTKP33981 857 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 CREB5Q02930 508 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 NSUN2Q08J23 767 aaKnown RBP eCLIP12.85□□□□□ -0.35
HERC6-202ENST00000273960 SEMA5AQ13591 1074 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 CCDC58Q4VC31 144 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 NUDT8Q8WV74 236 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 RPL3LQ92901 407 aaKnown RBP12.85□□□□□ -0.35
HERC6-202ENST00000273960 OSBPL2Q9H1P3 480 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 NRBP2Q9NSY0 501 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 DNMT3BQ9UBC3 853 aaKnown RBP12.85□□□□□ -0.35
HERC6-202ENST00000273960 VPS28Q9UK41 221 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms