RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CAB39LQ9H9S4 337 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PRDM5Q9NQX1 630 aaPredicted RBP16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CDH7Q9ULB5 785 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 OGDHLQ9ULD0 1010 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PDCD11Q14690 1871 aaKnown RBP16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 MYO7AQ13402 2215 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HDAC3O15379 428 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TRIM13O60858 407 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 JUNP05412 331 aaKnown RBP16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 DMPKQ09013 629 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CAMK2BQ13554 666 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 INAQ16352 499 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SLC39A5Q6ZMH5 540 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 COLGALT1Q8NBJ5 622 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CLIP3Q96DZ5 547 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 P2RY11Q96G91 374 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PRDM12Q9H4Q4 367 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 RPF2Q9H7B2 306 aaKnown RBP16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SPO11Q9Y5K1 396 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FRMPD3Q5JV73 1810 aa16.03■□□□□ 0.16
MAP1LC3B-201ENST00000268607 C9IYK1 514 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 H0YJX3 145 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 H3BMQ9 156 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 EIF3FO00303 357 aaPredicted RBP16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TRIM38O00635 465 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 AQP9O43315 295 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GNAO1P09471 354 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 OR4Q2P0C623 313 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NR2C2P49116 596 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PRMT2P55345 433 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 RPS3AP61247 264 aaKnown RBP16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 UPP1Q16831 310 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GPR107Q5VW38 600 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CYP2R1Q6VVX0 501 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FAM35AQ86V20 835 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HERC6Q8IVU3 1022 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ZNF786Q8N393 782 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SLC15A4Q8N697 577 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ARNTL2Q8WYA1 636 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 COG8Q96MW5 612 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ARPC5LQ9BPX5 153 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HGH1Q9BTY7 390 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ATAD3AQ9NVI7 634 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GID8Q9NWU2 228 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 KRBA1A5PL33 1030 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TMEM114B3SHH9 223 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 RNF103O00237 685 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 DAB1O75553 588 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NEK2P51955 445 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GNA12Q03113 381 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 KCNJ8Q15842 424 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TANKQ92844 425 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SLCO4A1Q96BD0 722 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TAMM41Q96BW9 452 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ASB9Q96DX5 294 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ANKRD60Q9BZ19 345 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ZBTB26Q9HCK0 441 aa16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 DUS2Q9NX74 493 aaKnown RBP16.02■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CCDC162PA2VCL2 907 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TCAF2A6NFQ2 919 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 EEF2KO00418 725 aaKnown RBP16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 USP12O75317 370 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SEC24DO94855 1032 aaPredicted RBP16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 OR1G1P47890 313 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RPL14P50914 215 aaKnown RBP16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RALGDSQ12967 914 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SEMA5AQ13591 1074 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 AARS2Q5JTZ9 985 aaKnown RBP16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 FAM26DQ5JW98 314 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HMBOX1Q6NT76 420 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZBTB49Q6ZSB9 765 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SLC24A5Q71RS6 500 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CPSF7Q8N684 471 aaKnown RBP16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PPWD1Q96BP3 646 aaKnown RBP16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZNF385DQ9H6B1 395 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CXorf21Q9HAI6 301 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 DDIT4Q9NX09 232 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 UTP6Q9NYH9 597 aaKnown RBP16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 STAP1Q9ULZ2 295 aa16.02■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GRID2O43424 1007 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PIGNO95427 931 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 BDNFP23560 247 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PSMB4P28070 264 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SCNN1AP37088 669 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ETFBP38117 255 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GP5P40197 560 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TRIM25Q14258 630 aaKnown RBP16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 NHSL2Q5HYW2 709 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 C14orf80Q86SX3 495 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZNF598Q86UK7 904 aaKnown RBP16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 DNAI2Q9GZS0 605 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 NAA50Q9GZZ1 169 aaKnown RBP16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SIAEQ9HAT2 523 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SYBUQ9NX95 663 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZDHHC2Q9UIJ5 367 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 A0A087WXM4 84 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 A0A096LPK6 155 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 A0A0A0MRY4 1105 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 KCNU1A8MYU2 1149 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms