RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SPOCK2Q92563 424 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 FOXJ1Q92949 421 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 FSD1LQ9BXM9 530 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 FAM186AA6NE01 2351 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 PATE3B3GLJ2 98 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 LATO43561 262 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 TSPAN6O43657 245 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 SEC31AO94979 1220 aaKnown RBP18.4■□□□□ 0.54
SDF4-201ENST00000263741 ATXN1LP0C7T5 689 aaKnown RBP18.4■□□□□ 0.54
SDF4-201ENST00000263741 C6P13671 934 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 GEMP55040 296 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 MPP3Q13368 585 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 CNGA3Q16281 694 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 SIRPB2Q5JXA9 342 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 LAIR1Q6GTX8 287 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 USP45Q70EL2 814 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 ASCL5Q7RTU5 278 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 FEM1CQ96JP0 617 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 SLC6A18Q96N87 628 aa18.4■□□□□ 0.54
SDF4-201ENST00000263741 MCCC1Q96RQ3 725 aaPredicted RBP18.4■□□□□ 0.54
SDF4-201ENST00000263741 PIH1D1Q9NWS0 290 aaKnown RBP18.4■□□□□ 0.54
SDF4-201ENST00000263741 ZNF292O60281 2723 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 CAPN8A6NHC0 703 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 RAD51BO15315 384 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 ANXA9O76027 345 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 EPN2O95208 641 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 VIPR1P32241 457 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 GRIA4P48058 902 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 CCR5P51681 352 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 RPS21P63220 83 aaKnown RBP18.39■□□□□ 0.53
SDF4-201ENST00000263741 PRPSAP1Q14558 356 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 SLC14A2Q15849 920 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 PARP6Q2NL67 630 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 TMEM52BQ4KMG9 183 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 KIAA1161Q6NSJ0 714 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 DCLK2Q8N568 766 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 PDCD7Q8N8D1 485 aaKnown RBP18.39■□□□□ 0.53
SDF4-201ENST00000263741 SCRN2Q96FV2 425 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 ADGRE3Q9BY15 652 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 SEMA4AQ9H3S1 761 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 ETNK1Q9HBU6 452 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 FSCN3Q9NQT6 498 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 RAB6BQ9NRW1 208 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 VPS45Q9NRW7 570 aa18.39■□□□□ 0.53
SDF4-201ENST00000263741 ANKRD66B4E2M5 251 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 ZNF189O75820 626 aaPredicted RBP18.38■□□□□ 0.53
SDF4-201ENST00000263741 NDST3O95803 873 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 PAK4O96013 591 aaPredicted RBP18.38■□□□□ 0.53
SDF4-201ENST00000263741 ELFN1P0C7U0 828 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 ACTN2P35609 894 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 MPLP40238 635 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 PAFAH1B1P43034 410 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 LRRC66Q68CR7 880 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 TCEAL6Q6IPX3 200 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 RFLNAQ6ZTI6 216 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 TCEAL3Q969E4 200 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 PCED1AQ9H1Q7 454 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 PILRBQ9UKJ0 227 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 SHOC2Q9UQ13 582 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 SPO11Q9Y5K1 396 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 TDRD6O60522 2096 aaKnown RBP18.38■□□□□ 0.53
SDF4-201ENST00000263741 BPTFQ12830 3046 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 A0A1W2PPC4 97 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 A0A1W2PQ67 120 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 GM2AP17900 193 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 MRPS25P82663 173 aaKnown RBP18.38■□□□□ 0.53
SDF4-201ENST00000263741 C2orf54Q08AI8 447 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 SPDYCQ5MJ68 293 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 CRTC1Q6UUV9 634 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 LIPIQ6XZB0 460 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 ATL2Q8NHH9 583 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 HNRNPLLQ8WVV9 542 aaKnown RBP18.38■□□□□ 0.53
SDF4-201ENST00000263741 DNASE2BQ8WZ79 361 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 SERAC1Q96JX3 654 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 NCDNQ9UBB6 729 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 PCDH15Q96QU1 1955 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 GVINP1Q7Z2Y8 2422 aa18.38■□□□□ 0.53
SDF4-201ENST00000263741 LOC285095A0A1B0GVY8 99 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 CTAGE15A4D2H0 777 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 H0Y8X5 98 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 HEXIM1O94992 359 aaKnown RBP18.37■□□□□ 0.53
SDF4-201ENST00000263741 KRT14P02533 472 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 CTAGE8P0CG41 777 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 CD27P26842 260 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 ADRA1AP35348 466 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 SUOXP51687 545 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 CLDN2P57739 230 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 SLC1A5Q15758 541 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 SETMARQ53H47 684 aaPredicted RBP18.37■□□□□ 0.53
SDF4-201ENST00000263741 WDR45BQ5MNZ6 344 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 KCTD11Q693B1 232 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 NEK5Q6P3R8 708 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 LYSMD3Q7Z3D4 306 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 HSD11B1LQ7Z5J1 315 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 CTAGE6Q86UF2 777 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 CTAGE4Q8IX94 777 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 HINFPQ9BQA5 517 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 SLC17A9Q9BYT1 436 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 PAK5Q9P286 719 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 GMEB2Q9UKD1 530 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms