RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SEPHS2Q99611 448 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 CCDC28BQ9BUN5 200 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 C1orf50Q9BV19 199 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 AGO3Q9H9G7 860 aaKnown RBP9.15□□□□□ -0.94
MSH4-201ENST00000263187 RGS18Q9NS28 235 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 SLAMF8Q9P0V8 285 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 UXTQ9UBK9 157 aaPredicted RBP9.15□□□□□ -0.94
MSH4-201ENST00000263187 BCAP29Q9UHQ4 241 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 HS3ST4Q9Y661 456 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 A0A0J9YYE9 177 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 SLCO1B7G3V0H7 640 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 PIP5K1BO14986 540 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 TFPTP0C1Z6 253 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 GEMP55040 296 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 PRKCQQ04759 706 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 EFEMP1Q12805 493 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 PSMD5Q16401 504 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 RABL3Q5HYI8 236 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 C6orf10Q5SRN2 563 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 IQSEC1Q6DN90 963 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 AGMOQ6ZNB7 445 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 USP50Q70EL3 339 aaPredicted RBP9.15□□□□□ -0.94
MSH4-201ENST00000263187 OR13J1Q8NGT2 312 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 FAM81AQ8TBF8 368 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 TMEM74Q96NL1 305 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 FCRL5Q96RD9 977 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 FAM124BQ9H5Z6 455 aaPredicted RBP9.15□□□□□ -0.94
MSH4-201ENST00000263187 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.15□□□□□ -0.94
MSH4-201ENST00000263187 RBM47A0AV96 593 aaKnown RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 ANKRD33BA6NCL7 494 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 ENPP3O14638 875 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 INPP4BO15327 924 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 SUPT3HO75486 399 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 TRMUO75648 421 aaKnown RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 CDK4P11802 303 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CCNCP24863 283 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 PRDX3P30048 256 aaKnown RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 CRYBB1P53674 252 aaPredicted RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 PRKAA2P54646 552 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 STX1BP61266 288 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 RHDQ02161 417 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 RAB41Q5JT25 222 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 RANBP10Q6VN20 620 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 LIMS2Q7Z4I7 341 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CLVS1Q8IUQ0 354 aaPredicted RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 AHI1Q8N157 1196 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CFAP52Q8N1V2 620 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 PELI3Q8N2H9 469 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 SHCBP1Q8NEM2 672 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 C19orf60Q96EN9 201 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 ACOX2Q99424 681 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 GSTO2Q9H4Y5 243 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 TREX1Q9NSU2 369 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 ATXN10Q9UBB4 475 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 EBF1Q9UH73 591 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 NEU3Q9UQ49 428 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CEPT1Q9Y6K0 416 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 PLXNA1Q9UIW2 1896 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 MBLAC1A4D2B0 266 aaPredicted RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 NME4O00746 187 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 HTRA2O43464 458 aaPredicted RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 CRCPO75575 148 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CDH2P19022 906 aaPredicted RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 CD52P31358 61 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 HCAR3P49019 387 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 SERPINH1P50454 418 aaKnown RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 POU4F1Q01851 419 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 AAK1Q2M2I8 961 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 ZIK1Q3SY52 487 aaPredicted RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 SLC39A12Q504Y0 691 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 DPF3Q92784 378 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 RMND5BQ96G75 393 aaPredicted RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 PTPN18Q99952 460 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 SP110Q9HB58 689 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 SARS2Q9NP81 518 aaKnown RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 NSMCE4AQ9NXX6 385 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 DNAJC15Q9Y5T4 150 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 IRAK2O43187 625 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 GPR39O43194 453 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 NPHS1O60500 1241 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 KPNA6O60684 536 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 HGFP14210 728 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CAPN3P20807 821 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 ADRA1AP35348 466 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 HADHAP40939 763 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 PPP1R8Q12972 351 aaKnown RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 SQLEQ14534 574 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 SEMA3AQ14563 771 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 OR4D1Q15615 310 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 GNASQ5JWF2 1037 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 OTUD3Q5T2D3 398 aaPredicted RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 ISCA2Q86U28 154 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 EGFL6Q8IUX8 553 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CHERPQ8IWX8 916 aaKnown RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 TTC9BQ8N6N2 239 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CATSPER1Q8NEC5 780 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 ERLEC1Q96DZ1 483 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 TEX37Q96LM6 180 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CDK15Q96Q40 435 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms