RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 GAS2L1Q99501 681 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 ZNF711Q9Y462 761 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 CTPS1P17812 591 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 GNGT1P63211 74 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 TMPRSS15P98073 1019 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 PDE1BQ01064 536 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 CTBP1Q13363 440 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 TERF2Q15554 542 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 UGP2Q16851 508 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 ITPRIPL2Q3MIP1 535 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 ZC3HC1Q86WB0 502 aaKnown RBP22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 LMNTD2Q8IXW0 634 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 DENND1AQ8TEH3 1009 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 ATXN2LQ8WWM7 1075 aaKnown RBP22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 ISL2Q96A47 359 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 RHOJQ9H4E5 214 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 INTS9Q9NV88 658 aaKnown RBP22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 FBXO5Q9UKT4 447 aa22.95■■□□□ 1.26
SMARCB1-201ENST00000263121 CCDC162PA2VCL2 907 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 AHSGP02765 367 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 ALDOAP04075 364 aaKnown RBP22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 ALPIP09923 528 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 SP100P23497 879 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 ST8SIA6P61647 398 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 MPP1Q00013 466 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 FSTL4Q6MZW2 842 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 GALNT7Q86SF2 657 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 ANKRD42Q8N9B4 389 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 OR4K2Q8NGD2 314 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 OR6P1Q8NGX9 317 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 GABPB2Q8TAK5 448 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 CDKN2AIPNLQ96HQ2 116 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 APOPT1Q96IL0 206 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 VPS39Q96JC1 886 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 FAM161BQ96MY7 647 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 SRPK1Q96SB4 655 aaKnown RBP22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 HEPHQ9BQS7 1158 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 SUDS3Q9H7L9 328 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 POLR3BQ9NW08 1133 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 MKS1Q9NXB0 559 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 PHTF1Q9UMS5 762 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 PLA2G4CQ9UP65 541 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 PPIL1Q9Y3C6 166 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 WASF2Q9Y6W5 498 aa22.94■■□□□ 1.26
SMARCB1-201ENST00000263121 A0A1W2PQ67 120 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 GRXCR2A6NFK2 248 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 CAPN8A6NHC0 703 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 H3BQ06 376 aaPredicted RBP22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 GOT2P00505 430 aaKnown RBP22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 UGT2B4P06133 528 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 MAGEA12P43365 314 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 GDPD4Q6W3E5 623 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 PTAR1Q7Z6K3 402 aaPredicted RBP22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 SFTPA1Q8IWL2 248 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 DCLK2Q8N568 766 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 ACMSDQ8TDX5 336 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 NKIRAS1Q9NYS0 192 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 MTO1Q9Y2Z2 717 aaKnown RBP22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 BPTFQ12830 3046 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 OR51F1A6NGY5 319 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 TPP1O14773 563 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 RPA3P35244 121 aaPredicted RBP22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 MLLT1Q03111 559 aaPredicted RBP22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 CDKN3Q16667 212 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 LYSMD3Q7Z3D4 306 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 CILP2Q8IUL8 1156 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 GPR150Q8NGU9 434 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 SGSM3Q96HU1 749 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 LYSMD1Q96S90 227 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 GPR22Q99680 433 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 MTG2Q9H4K7 406 aa22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 MARCH4Q9P2E8 410 aaPredicted RBP22.93■■□□□ 1.26
SMARCB1-201ENST00000263121 SLC4A1P02730 911 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 HNF1BP35680 557 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 HMGCLP35914 325 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 ABCG1P45844 678 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 LEPRP48357 1165 aaKnown RBP22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 NEK3P51956 506 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 PAF1Q8N7H5 531 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 MGARPQ8TDB4 240 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 EID2BQ96D98 161 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 ATXN7L3BQ96GX2 97 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 LRCH3Q96II8 777 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 C19orf43Q9BQ61 176 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 IL17CQ9P0M4 197 aa22.92■■□□□ 1.26
SMARCB1-201ENST00000263121 A0A0U1RQS6 177 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 STX7O15400 261 aaKnown RBP22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 ZWINTO95229 277 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 LSP1P33241 339 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 HADHAP40939 763 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 CD151P48509 253 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 SERPINB8P50452 374 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 AFTPHQ6ULP2 937 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 OR4L1Q8NH43 312 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 GRIN3AQ8TCU5 1115 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 LRIG1Q96JA1 1093 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 KLHL32Q96NJ5 620 aa22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 MCCC1Q96RQ3 725 aaPredicted RBP22.91■■□□□ 1.26
SMARCB1-201ENST00000263121 GPR63Q9BZJ6 419 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms