RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PSMD3O43242 534 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 DFNA5O60443 496 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 NDST3O95803 873 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 CER1O95813 267 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 MT-CYBP00156 380 aaPredicted RBP18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 CTPS1P17812 591 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 ENGP17813 658 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 TGM1P22735 817 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 SNX1Q13596 522 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 LRRC14Q15048 493 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 AGERQ15109 404 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 PARP6Q2NL67 630 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 C4orf22Q6V702 233 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 GSTA5Q7RTV2 222 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 KDELC2Q7Z4H8 507 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 CCDC110Q8TBZ0 833 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 CCHCR1Q8TD31 782 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 TADA1Q96BN2 335 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 EDEM2Q9BV94 578 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 GTPBP2Q9BX10 602 aaKnown RBP18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 UBP1Q9NZI7 540 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 ANKRD6Q9Y2G4 727 aa18.8■□□□□ 0.6
CYSTM1-201ENST00000261811 A0A1B0GVT2 93 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 LNP1A1A4G5 178 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 TLR4O00206 839 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 HEXIM1O94992 359 aaKnown RBP18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 HLA-DPA1P20036 260 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 HNF1BP35680 557 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 WNT3AP56704 352 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 RALGDSQ12967 914 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 OASLQ15646 514 aaKnown RBP18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 TCEAL6Q6IPX3 200 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 RAVER1Q8IY67 606 aaKnown RBP18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 OXR1Q8N573 874 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 TMEM145Q8NBT3 493 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 IPMKQ8NFU5 416 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 ACTRT1Q8TDG2 376 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 TCEAL3Q969E4 200 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 RTP4Q96DX8 246 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 MYOCQ99972 504 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 TMEM9BQ9NQ34 198 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 GDF3Q9NR23 364 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 SAR1BQ9Y6B6 198 aa18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.79■□□□□ 0.6
CYSTM1-201ENST00000261811 NPIPB15A6NHN6 443 aaPredicted RBP18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 PRLP01236 227 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 IFNB1P01574 187 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 ALPIP09923 528 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 PSMB4P28070 264 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 RABIFP47224 123 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 SEMG2Q02383 582 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 GRIK2Q13002 908 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 GALNT3Q14435 633 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 QPCTQ16769 361 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 DENND2CQ68D51 928 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 LYSMD1Q96S90 227 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 MAGEE1Q9HCI5 957 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 FZD3Q9NPG1 666 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 FEZ2Q9UHY8 353 aaPredicted RBP18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 COQ6Q9Y2Z9 468 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 DMDP11532 3685 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 KNL1Q8NG31 2342 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 GVINP1Q7Z2Y8 2422 aa18.78■□□□□ 0.6
CYSTM1-201ENST00000261811 USP34Q70CQ2 3546 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 C1orf232A0A0U1RR37 186 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 LOC285095A0A1B0GVY8 99 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 WNT9AO14904 365 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 RECQL5O94762 991 aaPredicted RBP18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 FGF1P05230 155 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 THEGLP0DJG4 465 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 YPEL5P62699 121 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 PTK2BQ14289 1009 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 FGL2Q14314 439 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 IHHQ14623 411 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 SIX1Q15475 284 aaPredicted RBP18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 CNGA3Q16281 694 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 PAPD7Q5XG87 772 aaKnown RBP18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 CRTC1Q6UUV9 634 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 KDELC1Q6UW63 502 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 KYAT3Q6YP21 454 aaKnown RBP18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 PTAR1Q7Z6K3 402 aaPredicted RBP18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 NETO1Q8TDF5 533 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 CENPTQ96BT3 561 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 NUS1Q96E22 293 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 TRIB3Q96RU7 358 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 WDR24Q96S15 920 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 RAD18Q9NS91 495 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 HACD3Q9P035 362 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 PAK5Q9P286 719 aa18.77■□□□□ 0.6
CYSTM1-201ENST00000261811 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.76■□□□□ 0.59
CYSTM1-201ENST00000261811 A0A1W2PR77 199 aa18.76■□□□□ 0.59
CYSTM1-201ENST00000261811 ERI2A8K979 691 aaKnown RBP18.76■□□□□ 0.59
CYSTM1-201ENST00000261811 E7EVH7 732 aa18.76■□□□□ 0.59
CYSTM1-201ENST00000261811 F5H423 210 aaPredicted RBP18.76■□□□□ 0.59
CYSTM1-201ENST00000261811 PYGLP06737 847 aa18.76■□□□□ 0.59
CYSTM1-201ENST00000261811 CASQ1P31415 396 aa18.76■□□□□ 0.59
CYSTM1-201ENST00000261811 FDFT1P37268 417 aa18.76■□□□□ 0.59
CYSTM1-201ENST00000261811 PAFAH1B1P43034 410 aa18.76■□□□□ 0.59
CYSTM1-201ENST00000261811 LMAN1P49257 510 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms