RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CLK3P49761 638 aaKnown RBP12.13□□□□□ -0.47
COL8A1-201ENST00000261037 UGT2B15P54855 530 aa12.13□□□□□ -0.47
COL8A1-201ENST00000261037 SPIRE1Q08AE8 756 aa12.13□□□□□ -0.47
COL8A1-201ENST00000261037 GK5Q6ZS86 529 aa12.13□□□□□ -0.47
COL8A1-201ENST00000261037 UBE2R2Q712K3 238 aaPredicted RBP12.13□□□□□ -0.47
COL8A1-201ENST00000261037 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
COL8A1-201ENST00000261037 OR52E6Q96RD3 313 aa12.13□□□□□ -0.47
COL8A1-201ENST00000261037 EQTNQ9NQ60 294 aa12.13□□□□□ -0.47
COL8A1-201ENST00000261037 OSER1Q9NX31 292 aa12.13□□□□□ -0.47
COL8A1-201ENST00000261037 SCN2BO60939 215 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 CCNA2P20248 432 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 MSX2P35548 267 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 MATKP42679 507 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 CAMK1DQ8IU85 385 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 FAM98AQ8NCA5 519 aaKnown RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 SLC9A7Q96T83 725 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 AARSD1Q9BTE6 412 aaKnown RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 ACE2Q9BYF1 805 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 RHOBTB2Q9BYZ6 727 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 CDH19Q9H159 772 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PRDM16Q9HAZ2 1276 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 ELNP15502 786 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 WARSP23381 471 aaKnown RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PSEN1P49768 467 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 RABGGTBP53611 331 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 CDH13P55290 713 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 FSTL1Q12841 308 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 DUSP4Q13115 394 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PDK3Q15120 406 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 DLG2Q15700 870 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 RNASE12Q5GAN4 147 aaKnown RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PACS1Q6VY07 963 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PAGE2Q7Z2X7 111 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PLEKHG4BQ96PX9 1271 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 FAM105AQ9NUU6 356 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PLSCR1O15162 318 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 SNX3O60493 162 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 ENTPD5O75356 428 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PCCBP05166 539 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TPP2P29144 1249 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 CDK18Q07002 472 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 RNF43Q68DV7 783 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 RPTNQ6XPR3 784 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 KCTD15Q96SI1 283 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 MCMBPQ9BTE3 642 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 LRRC19Q9H756 370 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 GMIPQ9P107 970 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 SH3GLB1Q9Y371 365 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 ZNF780BQ9Y6R6 833 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 RGSL1A5PLK6 1076 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 AZIN1O14977 448 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 OR1D2P34982 312 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 GRM5P41594 1212 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 CBX2Q14781 532 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 EEF1AKMT1Q8WVE0 214 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 SLC38A2Q96QD8 506 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 SGK2Q9HBY8 427 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 CNGB3Q9NQW8 809 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 RAP2CQ9Y3L5 183 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D3DA0A087WVF3 549 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D3IA0A087WXS9 549 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D3EA0A087X179 549 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D3KA0A087X1G2 549 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D3FA6NER0 549 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D3LB9A6J9 549 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 SCAMP1O15126 338 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D3HP0C7X1 549 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 BMP6P22004 513 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TNFRSF8P28908 595 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 GABRB2P47870 512 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PSMD8P48556 350 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PTDSS1P48651 473 aaKnown RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 ADARP55265 1226 aaKnown RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TAS2R41P59536 307 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TOP3AQ13472 1001 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 RIC1Q4ADV7 1423 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 PERM1Q5SV97 790 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 LRRC38Q5VT99 294 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D3GQ6DHY5 549 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D3CQ6IPX1 549 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D3Q8IZP1 549 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 ZNF557Q8N988 423 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-201ENST00000261037 CMTM6Q9NX76 183 aa12.12□□□□□ -0.47
COL8A1-201ENST00000261037 TCRBV9S1A1TA0A576 114 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 WNT7AO00755 349 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 RFXANKO14593 260 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 TNFRSF21O75509 655 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 IRGCQ6NXR0 463 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 TSPAN14Q8NG11 270 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 OR8D1Q8WZ84 308 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 ITCHQ96J02 903 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 ZNF354BQ96LW1 612 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 FGFBP2Q9BYJ0 223 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 ABCB10Q9NRK6 738 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 ZNF222Q9UK12 451 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 GIT1Q9Y2X7 761 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 SAMHD1Q9Y3Z3 626 aaKnown RBP12.11□□□□□ -0.47
COL8A1-201ENST00000261037 TEX28O15482 410 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 ITGB5P18084 799 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms