RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 IRX4P78413 519 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CTBSQ01459 385 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 TAF1BQ53T94 588 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 Q5BKY6 102 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF805Q5CZA5 627 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 TOR1AIP1Q5JTV8 583 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 LETMD1Q6P1Q0 360 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ETV3LQ6ZN32 361 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF767PQ75MW2 155 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 SLC43A2Q8N370 569 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 AKR7LQ8NHP1 331 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF671Q8TAW3 534 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 EDARADDQ8WWZ3 215 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 DUS3LQ96G46 650 aaKnown RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CNBD2Q96M20 576 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CHCHD6Q9BRQ6 235 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZMYND12Q9H0C1 365 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 OR51M1Q9H341 326 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 GLOD4Q9HC38 313 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 RASSF1Q9NS23 344 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 B3GNT2Q9NY97 397 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 TMEM216Q9P0N5 145 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZFP69BQ9UJL9 534 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 RAB26Q9ULW5 256 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 PMF1-BGLAPU3KQ54 211 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ATP8B3O60423 1300 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 TMEM82A0PJX8 343 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 F8VP50 259 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 H3BMQ9 156 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 TEX33O43247 280 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 AKAP8O43823 692 aaKnown RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CIB2O75838 187 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 BEST1O76090 585 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 NDUFB7P17568 137 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ATP5F1P24539 256 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 MAPK3P27361 379 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CDH6P55285 790 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 HERVK_113P62684 666 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 IFI35P80217 286 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ARHGAP8P85298 464 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 MAT1AQ00266 395 aaKnown RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 MEF2AQ02078 507 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 SP2Q02086 613 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CYP27A1Q02318 531 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 HSF2Q03933 536 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 STARD3Q14849 445 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZBED5Q49AG3 693 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 MANEALQ5VSG8 457 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 MLIPQ5VWP3 458 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZFP1Q6P2D0 407 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZPBP2Q6X784 338 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 RIPOR1Q6ZS17 1223 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 TMC3Q7Z5M5 1100 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 BTLAQ7Z6A9 289 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 SLC22A16Q86VW1 577 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 NUTM2AQ8IVF1 878 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 DSELQ8IZU8 1212 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 TMEM35BQ8NCS4 154 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF420Q8TAQ5 688 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 GRIN3AQ8TCU5 1115 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 HDAC10Q969S8 669 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CRELD1Q96HD1 420 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 SGCZQ96LD1 299 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 NSMCE2Q96MF7 247 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 RIPOR3Q96MK2 946 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 TUBB6Q9BUF5 446 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 GTPBP2Q9BX10 602 aaKnown RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 SLC26A6Q9BXS9 759 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 HMG20AQ9NP66 347 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 AKAP7Q9P0M2 348 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CTSFQ9UBX1 484 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 APEX2Q9UBZ4 518 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 SPATA31A6Q5VVP1 1343 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 A0A1W2PQ27 194 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 A0A1W2PQ64 194 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 A0A1W2PQD8 194 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 MFSD2BA6NFX1 497 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 NDUFS8O00217 210 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 SORBS3O60504 671 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 IPO13O94829 963 aaKnown RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 FAM13AO94988 1023 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 RBP1P09455 135 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 PRPS2P11908 318 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 FDPSP14324 419 aaKnown RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ALDH4A1P30038 563 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 NMT1P30419 496 aaKnown RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 GRK3P35626 688 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 PGM1P36871 562 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 PBX1P40424 430 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 KIR3DL2P43630 455 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 CDH4P55283 916 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 EIF6P56537 245 aaKnown RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 CABP4P57796 275 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF169Q14929 603 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 POLD3Q15054 466 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 IRF4Q15306 451 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 CALCRLQ16602 461 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ZBTB37Q5TC79 503 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ANKS6Q68DC2 871 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms