RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 CAPN6Q9Y6Q1 641 aa25.16■■□□□ 1.62
LSM7-201ENST00000252622 A0A0J9YYE9 177 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 NPIPB15A6NHN6 443 aaPredicted RBP25.15■■□□□ 1.62
LSM7-201ENST00000252622 A8MX80 341 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 HACD1B0YJ81 288 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 KRT86O43790 486 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 PRLP01236 227 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 TRBC1P01850 177 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 NME1P15531 152 aaKnown RBP25.15■■□□□ 1.62
LSM7-201ENST00000252622 LHCGRP22888 699 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 PTPN3P26045 913 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 THOP1P52888 689 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 MTM1Q13496 603 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 SLC14A2Q15849 920 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 B4GALNT4Q76KP1 1039 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 CBARPQ8N350 705 aaPredicted RBP25.15■■□□□ 1.62
LSM7-201ENST00000252622 HAUS1Q96CS2 278 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 IMP4Q96G21 291 aaKnown RBP25.15■■□□□ 1.62
LSM7-201ENST00000252622 AGAP3Q96P47 875 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 HERPUD2Q9BSE4 406 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 SLC25A51Q9H1U9 297 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 PCDH9Q9HC56 1237 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 CHKBQ9Y259 395 aa25.15■■□□□ 1.62
LSM7-201ENST00000252622 COL5A1P20908 1838 aaPredicted RBP25.14■■□□□ 1.62
LSM7-201ENST00000252622 GOLGA6L3A6NEY3 463 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 FTCDO95954 541 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 CSF2P04141 144 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 CTPS1P17812 591 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 EPHB1P54762 984 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 XRCC4Q13426 336 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 ACOX1Q15067 660 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 NOMO1Q15155 1222 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 MACC1Q6ZN28 852 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 ZC3H18Q86VM9 953 aaKnown RBP25.14■■□□□ 1.62
LSM7-201ENST00000252622 UBE2Q2Q8WVN8 375 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 TEKT5Q96M29 485 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 DNAJC28Q9NX36 388 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 DNPEPQ9ULA0 475 aa25.14■■□□□ 1.62
LSM7-201ENST00000252622 DDX3YO15523 660 aaKnown RBP25.13■■□□□ 1.61
LSM7-201ENST00000252622 NRDCO43847 1150 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 SDC3O75056 442 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 PIAS2O75928 621 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 PCCBP05166 539 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 ALPIP09923 528 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 PYGMP11217 842 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 HNF1BP35680 557 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 HNRNPKP61978 463 aaKnown RBP eCLIP25.13■■□□□ 1.612e-6■■■■□ 21.9
LSM7-201ENST00000252622 CCZ1BP86790 482 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 CCZ1P86791 482 aaPredicted RBP25.13■■□□□ 1.61
LSM7-201ENST00000252622 WASHC5Q12768 1159 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 ARHGEF7Q14155 803 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 CCDC181Q5TID7 509 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 ZNF662Q6ZS27 426 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 TADA1Q96BN2 335 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 VAT1Q99536 393 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 GLOD4Q9HC38 313 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 FTSJ1Q9UET6 329 aa25.13■■□□□ 1.61
LSM7-201ENST00000252622 CAPN8A6NHC0 703 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 H3BM21 787 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 TNFSF14O43557 240 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 TRIM16O95361 564 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 CCDC175P0C221 793 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 FTH1P19P0C7X4 201 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 ZNF30P17039 623 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 DGKAP23743 735 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 EIF2B5Q13144 721 aaKnown RBP25.12■■□□□ 1.61
LSM7-201ENST00000252622 INPP5AQ14642 412 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 ESRP1Q6NXG1 681 aaKnown RBP25.12■■□□□ 1.61
LSM7-201ENST00000252622 TSPAN33Q86UF1 283 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 LPCAT1Q8NF37 534 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 HTR3CQ8WXA8 447 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 NUS1Q96E22 293 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 DTD2Q96FN9 168 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 HES6Q96HZ4 224 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 LYSMD1Q96S90 227 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 RBM15Q96T37 977 aaKnown RBP eCLIP25.12■■□□□ 1.61
LSM7-201ENST00000252622 APOOQ9BUR5 198 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 GUCA1BQ9UMX6 200 aa25.12■■□□□ 1.61
LSM7-201ENST00000252622 PACSIN2Q9UNF0 486 aaPredicted RBP25.12■■□□□ 1.61
LSM7-201ENST00000252622 TJP3O95049 919 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 OTUD4Q01804 1114 aaKnown RBP25.11■■□□□ 1.61
LSM7-201ENST00000252622 NFATC4Q14934 902 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 PTPRRQ15256 657 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 ZNF542PQ5EBM4 170 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 LRRC66Q68CR7 880 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 CRTC1Q6UUV9 634 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 HSD11B1LQ7Z5J1 315 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 SLC25A45Q8N413 288 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 EID2Q8N6I1 236 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 PLA2G15Q8NCC3 412 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 ACTL9Q8TC94 416 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 ADGRE3Q9BY15 652 aa25.11■■□□□ 1.61
LSM7-201ENST00000252622 APOBEC2Q9Y235 224 aaKnown RBP25.11■■□□□ 1.61
LSM7-201ENST00000252622 HTR1BP28222 390 aa25.1■■□□□ 1.61
LSM7-201ENST00000252622 KIAA1024LP59773 190 aa25.1■■□□□ 1.61
LSM7-201ENST00000252622 QPCTQ16769 361 aa25.1■■□□□ 1.61
LSM7-201ENST00000252622 FAM182AQ5T1J6 154 aa25.1■■□□□ 1.61
LSM7-201ENST00000252622 AADACL2Q6P093 401 aa25.1■■□□□ 1.61
LSM7-201ENST00000252622 RAVER1Q8IY67 606 aaKnown RBP25.1■■□□□ 1.61
LSM7-201ENST00000252622 ATL2Q8NHH9 583 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms