RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 PARNO95453 639 aaKnown RBP17.06■□□□□ 0.32
FOXA1-201ENST00000250448 PSME3P61289 254 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 DUSP4Q13115 394 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 CYTH1Q15438 398 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 ITPRIPL1Q6GPH6 555 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 SLC41A1Q8IVJ1 513 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 KDM1BQ8NB78 822 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 ZSCAN18Q8TBC5 510 aaPredicted RBP17.06■□□□□ 0.32
FOXA1-201ENST00000250448 DQX1Q8TE96 717 aaKnown RBP17.06■□□□□ 0.32
FOXA1-201ENST00000250448 TOP1MTQ969P6 601 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 TMEM106CQ9BVX2 250 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 RNF11Q9Y3C5 154 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 RAD54BQ9Y620 910 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 H0YJX3 145 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 H3BSA7 217 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 C8BP07358 591 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 CDH2P19022 906 aaPredicted RBP17.05■□□□□ 0.32
FOXA1-201ENST00000250448 EN2P19622 333 aaPredicted RBP17.05■□□□□ 0.32
FOXA1-201ENST00000250448 ZBTB17Q13105 803 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 NRF1Q16656 503 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 CCNYL1Q8N7R7 359 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 TSPAN14Q8NG11 270 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 IRGQQ8WZA9 623 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 UTP6Q9NYH9 597 aaKnown RBP17.05■□□□□ 0.32
FOXA1-201ENST00000250448 SHROOM3Q8TF72 1996 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 CCDC78A2IDD5 438 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 C7orf72A4D263 438 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 MTMR11A4FU01 709 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 KCNU1A8MYU2 1149 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 SDHDO14521 159 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 TRMUO75648 421 aaKnown RBP17.05■□□□□ 0.32
FOXA1-201ENST00000250448 TPI1P60174 286 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 TXNL4AP83876 142 aaKnown RBP17.05■□□□□ 0.32
FOXA1-201ENST00000250448 NFE2Q16621 373 aaPredicted RBP17.05■□□□□ 0.32
FOXA1-201ENST00000250448 NPWQ8N729 165 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 GIPC2Q8TF65 315 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 AUTS2Q8WXX7 1259 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 RNF34Q969K3 372 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 ZNF597Q96LX8 424 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 CCT7Q99832 543 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 PCDHGA7Q9Y5G6 932 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 GMEB1Q9Y692 573 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 CHD7Q9P2D1 2997 aa17.05■□□□□ 0.32
FOXA1-201ENST00000250448 COL4A6Q14031 1691 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 hCG_2014768A0A024R1R8 64 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 TRPC5OSA6NMA1 111 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 COL6A2P12110 1019 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 ADRA1BP35368 520 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 WDR5P61964 334 aaKnown RBP17.04■□□□□ 0.32
FOXA1-201ENST00000250448 BTBD8Q5XKL5 378 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 PCDH20Q8N6Y1 951 aaKnown RBP17.04■□□□□ 0.32
FOXA1-201ENST00000250448 GAB3Q8WWW8 586 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 MAELQ96JY0 434 aaKnown RBP17.04■□□□□ 0.32
FOXA1-201ENST00000250448 TMEM175Q9BSA9 504 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 SEMA6AQ9H2E6 1030 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 COQ10BQ9H8M1 238 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 AP4S1Q9Y587 144 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 MYO16Q9Y6X6 1858 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 ZBBXA8MT70 800 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 NCAM2O15394 837 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 ZNF23P17027 643 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 DNAJB2P25686 324 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 OR1D2P34982 312 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 TSTD2Q5T7W7 516 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 LZICQ8WZA0 190 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 CASP10Q92851 521 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 IGSF21Q96ID5 467 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 TKTL2Q9H0I9 626 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 MRPL40Q9NQ50 206 aaKnown RBP17.04■□□□□ 0.32
FOXA1-201ENST00000250448 GMIPQ9P107 970 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 TRHDEQ9UKU6 1024 aa17.04■□□□□ 0.32
FOXA1-201ENST00000250448 A0A0J9YVX5 310 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 MTSS1O43312 755 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 NPHS1O60500 1241 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 DNAJB1P25685 340 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 PSMD8P48556 350 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 DCTN2Q13561 401 aaKnown RBP17.03■□□□□ 0.32
FOXA1-201ENST00000250448 BTG3Q14201 252 aaPredicted RBP17.03■□□□□ 0.32
FOXA1-201ENST00000250448 TRIM25Q14258 630 aaKnown RBP17.03■□□□□ 0.32
FOXA1-201ENST00000250448 KIAA1841Q6NSI8 718 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 PTAR1Q7Z6K3 402 aaPredicted RBP17.03■□□□□ 0.32
FOXA1-201ENST00000250448 FBXO22Q8NEZ5 403 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 CEP70Q8NHQ1 597 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 LRTOMTQ8WZ04 291 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 OSBPL11Q9BXB4 747 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 UBP1Q9NZI7 540 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 RSL24D1Q9UHA3 163 aaKnown RBP17.03■□□□□ 0.32
FOXA1-201ENST00000250448 ACOT9Q9Y305 439 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 OR6C75A6NL08 312 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 E7ENX8 843 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 TBX18O95935 607 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 GABRB3P28472 473 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 CDH17Q12864 832 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 SEMA3BQ13214 749 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 PDAP1Q13442 181 aaKnown RBP17.03■□□□□ 0.32
FOXA1-201ENST00000250448 ZNF460Q14592 562 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 CARM1Q86X55 608 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 NUP93Q8N1F7 819 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 PELI3Q8N2H9 469 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 HDAC11Q96DB2 347 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms