RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 GALNT3Q14435 633 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 LONRF1Q17RB8 773 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 PDPK2PQ6A1A2 396 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 SFTPA1Q8IWL2 248 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 STK40Q8N2I9 435 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 CBARPQ8N350 705 aaPredicted RBP12.98□□□□□ -0.33
LSM8-201ENST00000249299 PAF1Q8N7H5 531 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 OR6K2Q8NGY2 324 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 OR2T3Q8NH03 318 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 CALML6Q8TD86 181 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 KLHL32Q96NJ5 620 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 RUFY1Q96T51 708 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 PLAC1Q9HBJ0 212 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 PRDM6Q9NQX0 595 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 RAD18Q9NS91 495 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 NLE1Q9NVX2 485 aaPredicted RBP12.98□□□□□ -0.33
LSM8-201ENST00000249299 CACNA2D2Q9NY47 1150 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 VPS18Q9P253 973 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 RABGEF1Q9UJ41 708 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 PLAAQ9Y263 795 aa12.98□□□□□ -0.33
LSM8-201ENST00000249299 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.98□□□□□ -0.33
LSM8-201ENST00000249299 UPK3BL1B0FP48 263 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 UPK3BL2E5RIL1 263 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 PSMD11O00231 422 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 OPA1O60313 960 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 ATG13O75143 517 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 CDH16O75309 829 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 BANF1O75531 89 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 CTSLP07711 333 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 C5AR1P21730 350 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 ZNF140P52738 457 aaPredicted RBP12.97□□□□□ -0.33
LSM8-201ENST00000249299 CRADDP78560 199 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 ELP6Q0PNE2 266 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 C6orf132Q5T0Z8 1188 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 EMC10Q5UCC4 262 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 ERAP2Q6P179 960 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 KIAA0408Q6ZU52 694 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 GLT6D1Q7Z4J2 308 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 GALNT7Q86SF2 657 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 LRRC6Q86X45 466 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 CNTN4Q8IWV2 1026 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 TTC30BQ8N4P2 665 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 PIP4K2CQ8TBX8 421 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 GRIN3AQ8TCU5 1115 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 BLOC1S5Q8TDH9 187 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 FAM131CQ96AQ9 280 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 CERS2Q96G23 380 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 ACOX2Q99424 681 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 IER2Q9BTL4 223 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 ZFYVE1Q9HBF4 777 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 DYRK4Q9NR20 520 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 KCTD5Q9NXV2 234 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 NFKBIL1Q9UBC1 381 aaPredicted RBP12.97□□□□□ -0.33
LSM8-201ENST00000249299 ZNF180Q9UJW8 692 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 MMP17Q9ULZ9 603 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 PKP3Q9Y446 797 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 ZNF711Q9Y462 761 aa12.97□□□□□ -0.33
LSM8-201ENST00000249299 MUC22E2RYF6 1773 aaPredicted RBP12.97□□□□□ -0.33
LSM8-201ENST00000249299 KANSL1LA0AUZ9 987 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 GOLGA6L10A6NI86 522 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 C16orf96A6NNT2 1141 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 RASGRF2O14827 1237 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 AP1G1O43747 822 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 C1QAP02745 245 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 CHRNB1P11230 501 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 HLA-EP13747 358 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 TIMP2P16035 220 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 XPAP23025 273 aaPredicted RBP12.96□□□□□ -0.33
LSM8-201ENST00000249299 CNTFP26441 200 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 GKP32189 559 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 SLC8A1P32418 973 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 HNF1BP35680 557 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 MTM1Q13496 603 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 CDKN3Q16667 212 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 HP1BP3Q5SSJ5 553 aaPredicted RBP12.96□□□□□ -0.33
LSM8-201ENST00000249299 ZNF776Q68DI1 518 aaPredicted RBP12.96□□□□□ -0.33
LSM8-201ENST00000249299 ERN2Q76MJ5 926 aaKnown RBP12.96□□□□□ -0.33
LSM8-201ENST00000249299 MTERF4Q7Z6M4 381 aaKnown RBP12.96□□□□□ -0.33
LSM8-201ENST00000249299 TTC7BQ86TV6 843 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 SLC26A11Q86WA9 606 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 MDGA1Q8NFP4 955 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 FBF1Q8TES7 1133 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 ZNF669Q96BR6 464 aaPredicted RBP12.96□□□□□ -0.33
LSM8-201ENST00000249299 MFSD3Q96ES6 412 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 PGM2Q96G03 612 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 CFAP36Q96G28 342 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 FCRL3Q96P31 734 aaPredicted RBP12.96□□□□□ -0.33
LSM8-201ENST00000249299 ZIM3Q96PE6 472 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 SH3GL2Q99962 352 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 FAM167BQ9BTA0 163 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 DHRS4Q9BTZ2 278 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 KRTAP3-3Q9BYR6 98 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 KRTAP3-2Q9BYR7 98 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 STMN4Q9H169 189 aaPredicted RBP12.96□□□□□ -0.33
LSM8-201ENST00000249299 MFSD1Q9H3U5 465 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 MED4Q9NPJ6 270 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 PIH1D1Q9NWS0 290 aaKnown RBP12.96□□□□□ -0.33
LSM8-201ENST00000249299 IL17CQ9P0M4 197 aa12.96□□□□□ -0.33
LSM8-201ENST00000249299 EYSQ5T1H1 3165 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms