RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 CYS1Q717R9 158 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 PARS2Q7L3T8 475 aaKnown RBP19.24■□□□□ 0.67
SBDS-201ENST00000246868 MDGA1Q8NFP4 955 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 CDKL2Q92772 493 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 ZNF778Q96MU6 729 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 ZIM3Q96PE6 472 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 SMIM14Q96QK8 99 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 ACSS3Q9H6R3 686 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 ZFYVE1Q9HBF4 777 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 LTB4R2Q9NPC1 389 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 MMP17Q9ULZ9 603 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 PKP3Q9Y446 797 aa19.24■□□□□ 0.67
SBDS-201ENST00000246868 ZCWPW2A0A1B0GU75 182 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 EXOC1LA0A1B0GW35 172 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 STX7O15400 261 aaKnown RBP19.23■□□□□ 0.67
SBDS-201ENST00000246868 ALDH1A2O94788 518 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 CHRNB1P11230 501 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 TIMP2P16035 220 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 CST6Q15828 149 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 CNGA3Q16281 694 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 PDPK2PQ6A1A2 396 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 KIAA1211LQ6NV74 962 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 ESRP1Q6NXG1 681 aaKnown RBP19.23■□□□□ 0.67
SBDS-201ENST00000246868 ZNF449Q6P9G9 518 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 LYSMD3Q7Z3D4 306 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 GABPB2Q8TAK5 448 aaPredicted RBP19.23■□□□□ 0.67
SBDS-201ENST00000246868 CERS2Q96G23 380 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 FCRL3Q96P31 734 aaPredicted RBP19.23■□□□□ 0.67
SBDS-201ENST00000246868 LMAN1LQ9HAT1 526 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 PLAC1Q9HBJ0 212 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 PCDH12Q9NPG4 1184 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 TREX1Q9NSU2 369 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 C20orf96Q9NUD7 363 aaPredicted RBP19.23■□□□□ 0.67
SBDS-201ENST00000246868 MOCS1Q9NZB8 636 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 MUTYHQ9UIF7 546 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 RABGEF1Q9UJ41 708 aa19.23■□□□□ 0.67
SBDS-201ENST00000246868 NPIPB15A6NHN6 443 aaPredicted RBP19.22■□□□□ 0.67
SBDS-201ENST00000246868 AURKAO14965 403 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 C5AR1P21730 350 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 TARSP26639 723 aaKnown RBP19.22■□□□□ 0.67
SBDS-201ENST00000246868 HMGCLP35914 325 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 HADHAP40939 763 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 NEK3P51956 506 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 ZNF140P52738 457 aaPredicted RBP19.22■□□□□ 0.67
SBDS-201ENST00000246868 PRAMEP78395 509 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 ARHGEF7Q14155 803 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 KIAA0930Q6ICG6 404 aaPredicted RBP19.22■□□□□ 0.67
SBDS-201ENST00000246868 ERN2Q76MJ5 926 aaKnown RBP19.22■□□□□ 0.67
SBDS-201ENST00000246868 CROCCP2Q86T23 111 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 ARRDC3Q96B67 414 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 HDAC8Q9BY41 377 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 PPCSQ9HAB8 311 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 B4GALT6Q9UBX8 382 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 SLC2A6Q9UGQ3 507 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 KCTD3Q9Y597 815 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 A0A1W2PQF6 199 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 FAM170BA6NMN3 283 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 STK25O00506 426 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 ATG13O75143 517 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 VAPBO95292 243 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 SHBGP04278 402 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 ZNF30P17039 623 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 VIPR1P32241 457 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 MGAT5Q09328 741 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 ELP6Q0PNE2 266 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 PTPRRQ15256 657 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 LRRC73Q5JTD7 316 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 TRMT10BQ6PF06 316 aaKnown RBP19.22■□□□□ 0.67
SBDS-201ENST00000246868 KCNMB4Q86W47 210 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 ZNF687Q8N1G0 1237 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 TTC30BQ8N4P2 665 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 OR4K2Q8NGD2 314 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 OR2W6PQ8NHA6 318 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 RAB7BQ96AH8 199 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 PBXIP1Q96AQ6 731 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 DNAJC1Q96KC8 554 aaKnown RBP19.22■□□□□ 0.67
SBDS-201ENST00000246868 NLE1Q9NVX2 485 aaPredicted RBP19.22■□□□□ 0.67
SBDS-201ENST00000246868 POLR3BQ9NW08 1133 aaPredicted RBP19.22■□□□□ 0.67
SBDS-201ENST00000246868 IKBKGQ9Y6K9 419 aa19.22■□□□□ 0.67
SBDS-201ENST00000246868 GOLGA6L10A6NI86 522 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 A8MX80 341 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 MID1O15344 667 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 BUD23O43709 281 aaKnown RBP19.21■□□□□ 0.67
SBDS-201ENST00000246868 RPP40O75818 363 aaKnown RBP19.21■□□□□ 0.67
SBDS-201ENST00000246868 SASH3O75995 380 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 DNTTP04053 509 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 ADRB3P13945 408 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 COPAP53621 1224 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 RPS14P62263 151 aaKnown RBP19.21■□□□□ 0.67
SBDS-201ENST00000246868 SFSWAPQ12872 951 aaKnown RBP19.21■□□□□ 0.67
SBDS-201ENST00000246868 THOC5Q13769 683 aaKnown RBP19.21■□□□□ 0.67
SBDS-201ENST00000246868 KBTBD12Q3ZCT8 623 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 TTC31Q49AM3 519 aaPredicted RBP19.21■□□□□ 0.67
SBDS-201ENST00000246868 CEP85LQ5SZL2 805 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 LRRC66Q68CR7 880 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 CRTC1Q6UUV9 634 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 RASSF3Q86WH2 238 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 CACUL1Q86Y37 369 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 TMPRSS6Q8IU80 811 aa19.21■□□□□ 0.67
SBDS-201ENST00000246868 CTAGE3PQ8IX95 158 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms