RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 KRT33BQ14525 404 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 TAF1AQ15573 450 aaPredicted RBP11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 SPANXN3Q5MJ09 141 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 RD3Q7Z3Z2 195 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 CCDC63Q8NA47 563 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 STYXQ8WUJ0 223 aa11.16□□□□□ -0.62
TNFAIP3-201ENST00000237289 CACNB4O00305 520 aaPredicted RBP11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 CBX1P83916 185 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 HIBCHQ6NVY1 386 aaPredicted RBP11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 PKN3Q6P5Z2 889 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 SYT13Q7L8C5 426 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 PJA1Q8NG27 643 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 ART4Q93070 314 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 MRGPRX2Q96LB1 330 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 TLK1Q9UKI8 766 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 PLK4O00444 970 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 PPFIA2O75334 1257 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 GNSP15586 552 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 SPAM1P38567 509 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 QPCTQ16769 361 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 C9orf64Q5T6V5 341 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 FAM151BQ6UXP7 276 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 CAMKK1Q8N5S9 505 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 CLPBQ9H078 707 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 IARS2Q9NSE4 1012 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 A0A0J9YYE9 177 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 FPGTO14772 594 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 MUSKO15146 869 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 KRT37O76014 449 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 KRT38O76015 456 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 CLDN7O95471 211 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 SEMA4FO95754 770 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 TRBC1P01850 177 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 C21orf59P57076 290 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 STARD6P59095 220 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 RPS21P63220 83 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 LONRF1Q17RB8 773 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 DOK6Q6PKX4 331 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 SLC36A4Q6YBV0 504 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 LYSMD3Q7Z3D4 306 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 GPATCH11Q8N954 259 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 LRRN4CLQ8ND94 238 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 ARRDC2Q8TBH0 407 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZBTB9Q96C00 473 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 PABPC3Q9H361 631 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 SGK2Q9HBY8 427 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 PHPT1Q9NRX4 125 aaPredicted RBP11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZNF212Q9UDV6 495 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 CD84Q9UIB8 345 aa11.15□□□□□ -0.62
TNFAIP3-201ENST00000237289 GLYATL1P3A0A0U1RQE8 302 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 DNAJC6O75061 913 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 PYGLP06737 847 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 KELP23276 732 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 NAA30Q147X3 362 aaPredicted RBP11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 CNGA3Q16281 694 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 PTPRNQ16849 979 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 WDR45BQ5MNZ6 344 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 LRRC66Q68CR7 880 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 PDPK2PQ6A1A2 396 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 AFTPHQ6ULP2 937 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 PGBD5Q8N414 524 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 DEFB119Q8N690 84 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 HDAC10Q969S8 669 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 EBNA1BP2Q99848 306 aaKnown RBP11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 GDF3Q9NR23 364 aa11.15□□□□□ -0.63
TNFAIP3-201ENST00000237289 KRBA1A5PL33 1030 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 SLC25A14O95258 325 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 PCCBP05166 539 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 PDHA1P08559 390 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 CHRNB1P11230 501 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 HNF1BP35680 557 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 ARMCX6Q7L4S7 300 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 KCNMB4Q86W47 210 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 SFTPA1Q8IWL2 248 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 RLN3Q8WXF3 142 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 ATXN7L3BQ96GX2 97 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 IER2Q9BTL4 223 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 MAGEE1Q9HCI5 957 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 CHRAC1Q9NRG0 131 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 CATSPERZQ9NTU4 200 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 RGS16O15492 202 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 MAGEC1O60732 1142 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 ZNF7P17097 686 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 VCLP18206 1134 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 MC4RP32245 332 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 CAMK2GQ13555 558 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 TEAD4Q15561 434 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 CEP85LQ5SZL2 805 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 NEPROQ6NW34 567 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 LPCAT2Q7L5N7 544 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 ZNF398Q8TD17 642 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 SREK1Q8WXA9 508 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 NUS1Q96E22 293 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 SCRN2Q96FV2 425 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 NEU3Q9UQ49 428 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 TCAF1Q9Y4C2 921 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 MYO10Q9HD67 2058 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 NUP205Q92621 2012 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 IQANK1A0A1B0GTG1 560 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms