RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TNS4Q8IZW8 715 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 LILRB2Q8N423 598 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 TRPV3Q8NET8 790 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 ZFAND1Q8TCF1 268 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 SIGLEC10Q96LC7 697 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 TUFT1Q9NNX1 390 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 HSPBP1Q9NZL4 362 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 ZBBXA8MT70 800 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 WDR64B1ANS9 1081 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 PSMA4P25789 261 aaKnown RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 DEFA1P59665 94 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 DEFA3P59666 94 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 GCNT1Q02742 428 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 PRR16Q569H4 304 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 ARHGEF16Q5VV41 709 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 CYS1Q717R9 158 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 EBNA1BP2Q99848 306 aaKnown RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 GATA5Q9BWX5 397 aaPredicted RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 ROGDIQ9GZN7 287 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 MMP27Q9H306 513 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 RAB6BQ9NRW1 208 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 OPTCQ9UBM4 332 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 VAV3Q9UKW4 847 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 DIMT1Q9UNQ2 313 aaKnown RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 PDE10AQ9Y233 779 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 PCDHA11Q9Y5I1 949 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 SNX5Q9Y5X3 404 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 MAGEB16A2A368 324 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 CCDC78A2IDD5 438 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 TRIM13O60858 407 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 ADRB2P07550 413 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 FCGR1AP12314 374 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 IFI30P13284 250 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 GMPRP36959 345 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 ABCG1P45844 678 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 NCS1P62166 190 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 TFAMQ00059 246 aaKnown RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 AP3B2Q13367 1082 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 MAPRE2Q15555 327 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 C6orf141Q5SZD1 244 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 DPY19L3Q6ZPD9 716 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 ENOSF1Q7L5Y1 443 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 HMGCLL1Q8TB92 370 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 FAR1Q8WVX9 515 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 LENG9Q96B70 501 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 CHRAC1Q9NRG0 131 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 INTS10Q9NVR2 710 aaKnown RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 TAS2R9Q9NYW1 312 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 VTI1BQ9UEU0 232 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 ATG13O75143 517 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 H2AFYO75367 372 aaKnown RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 EVI2BP34910 448 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 RFC2P35250 354 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 NPTX2P47972 431 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 BNC1Q01954 994 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 MGAT3Q09327 533 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 IKQ13123 557 aaPredicted RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 TOP3AQ13472 1001 aaPredicted RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 STYK1Q6J9G0 422 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 FAM45BPQ6NSW5 357 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 LETMD1Q6P1Q0 360 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 TBPL2Q6SJ96 375 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 SPPL2CQ8IUH8 684 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 LIX1LQ8IVB5 337 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 FBXL13Q8NEE6 735 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 FAM45AQ8TCE6 357 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 ANKRD49Q8WVL7 239 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 USB1Q9BQ65 265 aaKnown RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 REXO4Q9GZR2 422 aaKnown RBP13.05□□□□□ -0.32
MSH2-201ENST00000233146 TMEM8AQ9HCN3 771 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 B3GNT2Q9NY97 397 aa13.05□□□□□ -0.32
MSH2-201ENST00000233146 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.05□□□□□ -0.32
MSH2-201ENST00000233146 PAPPAQ13219 1627 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 USP17L15C9J2P7 530 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 USP17L13C9JLJ4 530 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 USP17L11C9JVI0 530 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 USP17L18D6R9N7 530 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 USP17L22D6RA61 530 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 USP17L17D6RBQ6 530 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 USP17L19D6RCP7 530 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 USP17L20D6RJB6 530 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 APOC4-APOC2K7ER74 178 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 APOC2P02655 101 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 OXTRP30559 389 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 MAGEA3P43357 314 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 SOX9P48436 509 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 ZNF45Q02386 682 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 USP17L24Q0WX57 530 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 GRTP1Q5TC63 336 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 DARS2Q6PI48 645 aaKnown RBP13.04□□□□□ -0.32
MSH2-201ENST00000233146 METTL3Q86U44 580 aaKnown RBP13.04□□□□□ -0.32
MSH2-201ENST00000233146 P2RY8Q86VZ1 359 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 AMIGO1Q86WK6 493 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 OR4M2Q8NGB6 313 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 CRYGNQ8WXF5 182 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 PHOX2BQ99453 314 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 RSAD1Q9HA92 442 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 NTN4Q9HB63 628 aa13.04□□□□□ -0.32
MSH2-201ENST00000233146 SNX15Q9NRS6 342 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms