RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 MUS81Q96NY9 551 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 C16orf70Q9BSU1 422 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 HGH1Q9BTY7 390 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 BEGAINQ9BUH8 593 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 CEP44Q9C0F1 390 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 MIR1-1HGQ9H1L0 117 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 RAD21L1Q9H4I0 556 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 VTA1Q9NP79 307 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 SNTG2Q9NY99 539 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 GJD2Q9UKL4 321 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 USP22Q9UPT9 525 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 DERAQ9Y315 318 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 PCDHGA3Q9Y5H0 932 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 PTGDR2Q9Y5Y4 395 aa14.15□□□□□ -0.14
SF1-201ENST00000227503 RSL1D1O76021 490 aaKnown RBP14.14□□□□□ -0.15
SF1-201ENST00000227503 MZF1P28698 734 aaPredicted RBP14.14□□□□□ -0.15
SF1-201ENST00000227503 SHMT2P34897 504 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 MAGEA12P43365 314 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 PRKAA2P54646 552 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 BST2Q10589 180 aaKnown RBP14.14□□□□□ -0.15
SF1-201ENST00000227503 POLD3Q15054 466 aaPredicted RBP14.14□□□□□ -0.15
SF1-201ENST00000227503 IMPG1Q17R60 797 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 MARCH8Q5T0T0 291 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 DHRSXQ8N5I4 330 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 PSD4Q8NDX1 1056 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 SPPL2BQ8TCT7 592 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 HTRA1Q92743 480 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 MROQ9BYG7 248 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 PLEKHA5Q9HAU0 1116 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 EVLQ9UI08 416 aaPredicted RBP14.14□□□□□ -0.15
SF1-201ENST00000227503 PTBP2Q9UKA9 531 aaKnown RBP14.14□□□□□ -0.15
SF1-201ENST00000227503 SLC30A1Q9Y6M5 507 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 COL1A2P08123 1366 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 ZBBXA8MT70 800 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 ACOX3O15254 700 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 ADORA2BP29275 332 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 HOXA11P31270 313 aaPredicted RBP14.14□□□□□ -0.15
SF1-201ENST00000227503 APLP1P51693 650 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 SLC13A2Q13183 592 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 PYCR3Q53H96 274 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 ERO1BQ86YB8 467 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 LRRC52Q8N7C0 313 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 MFSD2AQ8NA29 543 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.14□□□□□ -0.155e-7■■■■■ 28.5
SF1-201ENST00000227503 PDZD8Q8NEN9 1154 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 SEPT8Q92599 483 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 SEPHS2Q99611 448 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 MROH8Q9H579 483 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 NOL6Q9H6R4 1146 aaKnown RBP14.14□□□□□ -0.15
SF1-201ENST00000227503 EIF2B3Q9NR50 452 aaKnown RBP14.14□□□□□ -0.15
SF1-201ENST00000227503 WDR70Q9NW82 654 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 TLK1Q9UKI8 766 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 FZD10Q9ULW2 581 aa14.14□□□□□ -0.15
SF1-201ENST00000227503 ASB14A6NK59 587 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 UBDO15205 165 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 INPP4BO15327 924 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 S100A1P23297 94 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 PLA2G16P53816 162 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 DCAF4L1Q3SXM0 396 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 XAF1Q6GPH4 301 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 STRADAQ7RTN6 431 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 PID1Q7Z2X4 250 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 ZNF354CQ86Y25 554 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 CENPLQ8N0S6 344 aaPredicted RBP14.13□□□□□ -0.15
SF1-201ENST00000227503 ZNF567Q8N184 647 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 TXNDC5Q8NBS9 432 aaKnown RBP14.13□□□□□ -0.15
SF1-201ENST00000227503 PPTC7Q8NI37 304 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 SEZ6LQ9BYH1 1024 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 MRPL46Q9H2W6 279 aaKnown RBP14.13□□□□□ -0.15
SF1-201ENST00000227503 AGPAT4Q9NRZ5 378 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 RNF19AQ9NV58 838 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.13□□□□□ -0.15
SF1-201ENST00000227503 PSME2Q9UL46 239 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 ZCWPW2A0A1B0GU75 182 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 NR5A2O00482 541 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 CYP2C8P10632 490 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 KCNA5P22460 613 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 LMO2P25791 158 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 BCAT1P54687 386 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 IFITM2Q01629 132 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 STX5Q13190 355 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 CAMK2BQ13554 666 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 ITIH5Q86UX2 942 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 KCNMB4Q86W47 210 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 FAM131BQ86XD5 332 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 CEP97Q8IW35 865 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 NDRG1Q92597 394 aaKnown RBP14.13□□□□□ -0.15
SF1-201ENST00000227503 C1QTNF1Q9BXJ1 281 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 EXD2Q9NVH0 621 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 TMEM181Q9P2C4 612 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 KCNH4Q9UQ05 1017 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 SPO11Q9Y5K1 396 aa14.13□□□□□ -0.15
SF1-201ENST00000227503 TRIM64A6NGJ6 449 aa14.12□□□□□ -0.15
SF1-201ENST00000227503 CLDN25C9JDP6 229 aa14.12□□□□□ -0.15
SF1-201ENST00000227503 NRP2O60462 931 aa14.12□□□□□ -0.15
SF1-201ENST00000227503 CLASP2O75122 1294 aaKnown RBP14.12□□□□□ -0.15
SF1-201ENST00000227503 BCAS1O75363 584 aaPredicted RBP14.12□□□□□ -0.15
SF1-201ENST00000227503 GPC4O75487 556 aa14.12□□□□□ -0.15
SF1-201ENST00000227503 SNRPB2P08579 225 aaKnown RBP14.12□□□□□ -0.15
SF1-201ENST00000227503 BDNFP23560 247 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms