RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PACSIN3Q9UKS6 424 aa18.49■□□□□ 0.55
CLIP2-201ENST00000223398 RNF225M0QZC1 329 aaPredicted RBP18.49■□□□□ 0.55
CLIP2-201ENST00000223398 HGFP14210 728 aa18.49■□□□□ 0.55
CLIP2-201ENST00000223398 GAD2Q05329 585 aa18.49■□□□□ 0.55
CLIP2-201ENST00000223398 CLEC4CQ8WTT0 213 aa18.49■□□□□ 0.55
CLIP2-201ENST00000223398 ASZ1Q8WWH4 475 aa18.49■□□□□ 0.55
CLIP2-201ENST00000223398 AARSD1Q9BTE6 412 aaKnown RBP18.49■□□□□ 0.55
CLIP2-201ENST00000223398 UGT2B28Q9BY64 529 aa18.49■□□□□ 0.55
CLIP2-201ENST00000223398 RNF39Q9H2S5 420 aa18.49■□□□□ 0.55
CLIP2-201ENST00000223398 COL14A1Q05707 1796 aaKnown RBP18.48■□□□□ 0.55
CLIP2-201ENST00000223398 NR2F1P10589 423 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 IDSP22304 550 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 NOMO1Q15155 1222 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 TAF13Q15543 124 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 ATXN7L2Q5T6C5 722 aaPredicted RBP18.48■□□□□ 0.55
CLIP2-201ENST00000223398 PLEKHA7Q6IQ23 1121 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 KLHL35Q6PF15 583 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 GALNT13Q8IUC8 556 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 ART4Q93070 314 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 SLC39A8Q9C0K1 460 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 COG5Q9UP83 839 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 PRKAB1Q9Y478 270 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 TCRBV9S1A1TA0A576 114 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 BTNL10A8MVZ5 291 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 ATG13O75143 517 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 RPP40O75818 363 aaKnown RBP18.48■□□□□ 0.55
CLIP2-201ENST00000223398 WARSP23381 471 aaKnown RBP18.48■□□□□ 0.55
CLIP2-201ENST00000223398 PRKG2Q13237 762 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 FMN2Q9NZ56 1722 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 ENPP3O14638 875 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 ME2P23368 584 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 DYNC1I2Q13409 638 aaKnown RBP18.48■□□□□ 0.55
CLIP2-201ENST00000223398 C17orf64Q86WR6 236 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 IRF2BP1Q8IU81 584 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 ATXN2LQ8WWM7 1075 aaKnown RBP18.48■□□□□ 0.55
CLIP2-201ENST00000223398 ACSS2Q9NR19 701 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 R3HDM2Q9Y2K5 976 aaKnown RBP18.48■□□□□ 0.55
CLIP2-201ENST00000223398 PIK3C2AO00443 1686 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 HIST1H2ABP04908 130 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 PSMB9P28065 219 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 APLP1P51693 650 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 ATXN1P54253 815 aaKnown RBP18.48■□□□□ 0.55
CLIP2-201ENST00000223398 MON1BQ7L1V2 547 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 HIST3H2AQ7L7L0 130 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 SLC26A9Q7LBE3 791 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 GPR141Q7Z602 305 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 BEND7Q8N7W2 519 aaPredicted RBP18.48■□□□□ 0.55
CLIP2-201ENST00000223398 HIST1H2ACQ93077 130 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 PGM2Q96G03 612 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 BTBD10Q9BSF8 475 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 INSL6Q9Y581 213 aa18.48■□□□□ 0.55
CLIP2-201ENST00000223398 CLUHO75153 1309 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 YJEFN3A6XGL0 299 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 E7ENQ6 273 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 PEX6Q13608 980 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 C1DQ13901 141 aaKnown RBP18.47■□□□□ 0.55
CLIP2-201ENST00000223398 MAPKAPK3Q16644 382 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 SH3RF2Q8TEC5 729 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 MTERF3Q96E29 417 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 UNC93B1Q9H1C4 597 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 KLHL1Q9NR64 748 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 CCDC189A1A4V9 331 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 KRT33AO76009 404 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 SPAM1P38567 509 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 CLK3P49761 638 aaKnown RBP18.47■□□□□ 0.55
CLIP2-201ENST00000223398 JAG1P78504 1218 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 PACS1Q6VY07 963 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 TMPRSS11BQ86T26 416 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 MBOAT7Q96N66 472 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 FZD8Q9H461 694 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 CHRAC1Q9NRG0 131 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 MAT2BQ9NZL9 334 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 ERVW-1Q9UQF0 538 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 GTPBP1O00178 669 aaKnown RBP18.47■□□□□ 0.55
CLIP2-201ENST00000223398 CFAP206Q8IYR0 622 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 PIWIL2Q8TC59 973 aaKnown RBP18.47■□□□□ 0.55
CLIP2-201ENST00000223398 TIFAQ96CG3 184 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 PPP3R2Q96LZ3 170 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 KLHL32Q96NJ5 620 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 GABRQQ9UN88 632 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 LRRC72A6NJI9 287 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 SSR2P43308 183 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 ATP6V0D1P61421 351 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 SH3D19Q5HYK7 790 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 PLD5Q8N7P1 536 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 PSMG2Q969U7 264 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 FAM83DQ9H4H8 585 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 TMCO1Q9UM00 188 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 PLIN4Q96Q06 1357 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 PRMT5O14744 637 aaPredicted RBP18.47■□□□□ 0.55
CLIP2-201ENST00000223398 DAOAP59103 153 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 CSNK2BP67870 215 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 DGKKQ5KSL6 1271 aa18.47■□□□□ 0.55
CLIP2-201ENST00000223398 PRCCQ92733 491 aaPredicted RBP18.47■□□□□ 0.55
CLIP2-201ENST00000223398 ARIH1Q9Y4X5 557 aaPredicted RBP18.47■□□□□ 0.55
CLIP2-201ENST00000223398 GMFGO60234 142 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 NDST3O95803 873 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 ACADSP16219 412 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 FGFR3P22607 806 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 TRIT1Q9H3H1 467 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms