RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CALML6Q8TD86 181 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 TMIGD2Q96BF3 282 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 TSPAN17Q96FV3 270 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 DUS3LQ96G46 650 aaKnown RBP17.33■□□□□ 0.36
USB1-201ENST00000219281 UBXN10Q96LJ8 280 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 PPP1R2P1Q96PQ5 205 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 MTG1Q9BT17 334 aaPredicted RBP17.33■□□□□ 0.36
USB1-201ENST00000219281 FAM105AQ9NUU6 356 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 NUDT5Q9UKK9 219 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 MTF2Q9Y483 593 aaPredicted RBP17.33■□□□□ 0.36
USB1-201ENST00000219281 FNDC1Q4ZHG4 1894 aaPredicted RBP17.33■□□□□ 0.36
USB1-201ENST00000219281 TRPM7Q96QT4 1865 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 PLOD2O00469 737 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 CCL22O00626 93 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 H6PDO95479 791 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 CKMT2P17540 419 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 CDH2P19022 906 aaPredicted RBP17.32■□□□□ 0.36
USB1-201ENST00000219281 IMPDH1P20839 514 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 CCR1P32246 355 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 RANBP1P43487 201 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 TRIM32Q13049 653 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 BRMS1LQ5PSV4 323 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 ARTNQ5T4W7 220 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 GPR158Q5T848 1215 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 KRT80Q6KB66 452 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 KDELC1Q6UW63 502 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 LARP4Q71RC2 724 aaKnown RBP eCLIP17.32■□□□□ 0.36
USB1-201ENST00000219281 C14orf80Q86SX3 495 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 NUP93Q8N1F7 819 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 RIN3Q8TB24 985 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 CASP10Q92851 521 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 C3orf30Q96M34 536 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 TMEM209Q96SK2 561 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 THEGQ9P2T0 379 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 IPO11Q9UI26 975 aaKnown RBP17.32■□□□□ 0.36
USB1-201ENST00000219281 VWA7Q9Y334 891 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 ARL5CA6NH57 179 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 HTRA2O43464 458 aaPredicted RBP17.32■□□□□ 0.36
USB1-201ENST00000219281 CTSHP09668 335 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 ZNF23P17027 643 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 SERPINH1P50454 418 aaKnown RBP17.32■□□□□ 0.36
USB1-201ENST00000219281 CDKN2DP55273 166 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 NME5P56597 212 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 MAXP61244 160 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 ITKQ08881 620 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 GALNT1Q10472 559 aaPredicted RBP17.32■□□□□ 0.36
USB1-201ENST00000219281 C8orf82Q6P1X6 216 aaPredicted RBP17.32■□□□□ 0.36
USB1-201ENST00000219281 FUNDC1Q8IVP5 155 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 SH3RF2Q8TEC5 729 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 CANT1Q8WVQ1 401 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 LRCH3Q96II8 777 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 UHRF1Q96T88 793 aaPredicted RBP17.32■□□□□ 0.36
USB1-201ENST00000219281 EFHD1Q9BUP0 239 aa17.32■□□□□ 0.36
USB1-201ENST00000219281 AKAP10O43572 662 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 TRMUO75648 421 aaKnown RBP17.31■□□□□ 0.36
USB1-201ENST00000219281 ALDOCP09972 364 aaKnown RBP17.31■□□□□ 0.36
USB1-201ENST00000219281 GRIA3P42263 894 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 SLC14A2Q15849 920 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 MAP7D1Q3KQU3 841 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 ZNF678Q5SXM1 525 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 IL31Q6EBC2 164 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 FAM171BQ6P995 826 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 ZBTB49Q6ZSB9 765 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 LRRTM3Q86VH5 581 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 CILP2Q8IUL8 1156 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 OR13J1Q8NGT2 312 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 OR6P1Q8NGX9 317 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 EXT2Q93063 718 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 IL1RL2Q9HB29 575 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 OLAHQ9NV23 265 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 MYRFQ9Y2G1 1151 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 SCN10AQ9Y5Y9 1956 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 TTC24A2A3L6 582 aaPredicted RBP17.31■□□□□ 0.36
USB1-201ENST00000219281 E9PAM4 449 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 H3BNH8 94 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 KPNA6O60684 536 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 STAMBPO95630 424 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 BRCC3P46736 316 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 CDH13P55290 713 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 STX1BP61266 288 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 HPCAP84074 193 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 CAP1Q01518 475 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 PRKCQQ04759 706 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 UNC50Q53HI1 259 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 AFMIDQ63HM1 303 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 HACD2Q6Y1H2 254 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 PIM3Q86V86 326 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 RETREG3Q86VR2 466 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 ALDH16A1Q8IZ83 802 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 HASPINQ8TF76 798 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 C19orf60Q96EN9 201 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 SLC25A51Q9H1U9 297 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 AGO3Q9H9G7 860 aaKnown RBP17.31■□□□□ 0.36
USB1-201ENST00000219281 PREBQ9HCU5 417 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 NT5MQ9NPB1 228 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 PNPLA3Q9NST1 481 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 RSL24D1Q9UHA3 163 aaKnown RBP17.31■□□□□ 0.36
USB1-201ENST00000219281 TRPV2Q9Y5S1 764 aa17.31■□□□□ 0.36
USB1-201ENST00000219281 OR51F1A6NGY5 319 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 SOCS2O14508 198 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms