RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Msl3Q9WVG9 525 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm3739L7N296 216 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Chrna4O70174 629 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rrm2P11157 390 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Psme3P61290 254 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 IgfalsP70389 603 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 BtrcQ3ULA2 605 aaKnown RBP15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rnf220Q6PDX6 566 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Abhd10Q6PE15 297 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Parp9Q8CAS9 866 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ago3Q8CJF9 860 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Acsf2Q8VCW8 615 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Syde1Q9DBZ9 737 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Nif3l1Q9EQ80 376 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm10720D3Z1I5 223 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ncam2O35136 837 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Vti1bO88384 232 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Sept4P28661 478 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 RxrgP28705 463 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Asgr1P34927 284 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 InaP46660 501 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 HpcaP84075 193 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Colec11Q3SXB8 272 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rsbn1Q80T69 795 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Fbxl21Q8BFZ4 434 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Smad3Q8BUN5 425 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mtrf1Q8K126 446 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 RorbQ8R1B8 470 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 SarafQ8R3Q0 334 aa15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 PollQ9QXE2 573 aaKnown RBP15.59■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Phf11A6H5X4 337 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Trim30bE9PVL6 203 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm10722F6VLK5 217 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm7535F7CXE4 302 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm3383J3QQ59 259 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Vmn2r4K7N784 913 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm3239L7N2D9 227 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Kcnn4O89109 425 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Aldh1a1P24549 501 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 RragdQ7TT45 449 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Plin5Q8BVZ1 463 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Wwp1Q8BZZ3 918 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Fam78aQ8C552 283 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Bclaf1Q8K019 919 aaKnown RBP15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mapre2Q8R001 326 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pwp1Q99LL5 501 aaKnown RBP15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pramel1Q99MW3 458 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Actrt2Q9D9L5 377 aa15.58■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 LdhcP00342 332 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 HmbsP22907 361 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Nfkb1P25799 971 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Adora2aQ60613 410 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Dnajb13Q80Y75 316 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 ClyblQ8R4N0 338 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Slc35c2Q8VCX2 364 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Vmn2r11E9Q4X4 861 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 PdynO35417 248 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ezh1P70351 747 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Dnajb14Q149L6 379 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cpsf4Q8BQZ5 211 aaKnown RBP15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ssh3Q8K330 649 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Rab14Q91V41 215 aaKnown RBP15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ndufs2Q91WD5 463 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Pcdhac2Q91Y09 1006 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Smpd3Q9JJY3 655 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tsc22d3Q9Z2S7 137 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Myh10Q61879 1976 aaKnown RBP15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 FocadA2AKG8 1798 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Vmn1r2A2AMT6 306 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm3259D3YUK0 475 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm5415E9PXF3 478 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tas2r16P59529 299 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cpne7Q0VE82 557 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Echdc2Q3TLP5 296 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Slitrk2Q810C0 846 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gsto2Q8K2Q2 248 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Olfr695Q8VFM3 315 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Sdcbp2Q99JZ0 292 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Hspa12bQ9CZJ2 685 aa15.58■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fam166bA2AIP0 273 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Rad21l1A2AU37 552 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ddx43D3Z6P9 646 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Mroh5E9PUJ8 762 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Olfr603L7N1Y4 312 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Col9a2Q07643 688 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Trpc5osQ3UHV4 110 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fbxw11Q5SRY7 542 aaKnown RBP15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ca4Q64444 305 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Pex26Q8BGI5 305 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Samd4aQ8CBY1 711 aaKnown RBP15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ago1Q8CJG1 857 aaKnown RBP15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ccdc59Q8R2N0 240 aaKnown RBP15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gfm2Q8R2Q4 779 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tnfaip8Q921Z5 198 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Snrpb2Q9CQI7 225 aaKnown RBP15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Scamp5Q9JKD3 235 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cntn6Q9JMB8 1028 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Hs6st1Q9QYK5 411 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Copg1Q9QZE5 874 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tubb1A2AQ07 451 aa15.57■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms