RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Eif2ak2Q03963 515 aaKnown RBP21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ankmy2Q3TPE9 440 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Tnks2Q3UES3 1166 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Slc9b2Q5BKR2 547 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Itga7Q61738 1179 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Taf1cQ6PDZ2 836 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Trpm4Q7TN37 1213 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Olfr299Q7TS05 330 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Abi3Q8BYZ1 367 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Lrrc42Q8R2U7 421 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Plpp3Q99JY8 312 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zmynd10Q99ML0 440 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Atoh8Q99NA2 322 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Tchhl1Q9D3P1 638 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cnbd2Q9D5U8 673 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm13283A0A087WPG5 182 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm3604A0A087WPN2 559 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Serpinb3cA2RSF9 386 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zfp1P08042 402 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Acvr1P37172 509 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Dsc1P55849 886 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 St14P56677 855 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 StyxQ60969 223 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Nfe2l1Q61985 741 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Fam167aQ6P1G6 215 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Q6P2K3 674 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Slc16a9Q7TM99 508 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Fbxo2Q80UW2 297 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zbtb33Q8BN78 671 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Pih1h3bQ8C6P5 218 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Vmn1r206Q8R277 312 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Slc30a5Q8R4H9 761 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Med17Q8VCD5 649 aaKnown RBP21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Wdr74Q8VCG3 384 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Elf4Q9Z2U4 655 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Lactbl1S4R213 581 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Pcsk5Q04592 1877 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Fam166bA2AIP0 273 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Skint8A7XV07 398 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Pdzd7E9Q9W7 1021 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cldn4O35054 210 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 ChrngP04760 519 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Snrpd1P62315 119 aaKnown RBP21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Fam107bQ3TGF2 131 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 StradaQ3UUJ4 431 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Foxd4Q60688 444 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Bcl2l1Q64373 233 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Olfr834Q7TRG8 312 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Adipor2Q8BQS5 386 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Bend7Q8BSV3 434 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 ItpkaQ8R071 459 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zfp566Q8VCI1 386 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zfp65Q91W94 390 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Bag2Q91YN9 210 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ndufab1Q9CR21 156 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Riok3Q9DBU3 519 aaKnown RBP21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 RhojQ9ER71 214 aa21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Orc1Q9Z1N2 840 aaKnown RBP21.25■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm1141B9EJU1 475 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Smok3aC0HKC8 504 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Smok3bC0HKC9 504 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Fam170bE9PXT9 378 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zfp846G3X996 541 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Sypl1O09117 261 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Diaph2O70566 1098 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Klc2O88448 599 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 SpnP15702 395 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 FasP25446 327 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Myl2P51667 166 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ripply1Q2WG77 201 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Slfn4Q3UV66 602 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 ADGRF3Q58Y75 991 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm7247Q6UY52 187 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ssx9Q6XAS3 170 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Nemp1Q6ZQE4 437 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Uts2bQ765I1 113 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 RalylQ8BTF8 293 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ephb1Q8CBF3 984 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Mrfap1Q9CQL7 125 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 S100pbpQ9D5K4 396 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Pik3cgQ9JHG7 1102 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ccr10Q9JL21 362 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Spag6Q9JLI7 507 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Hao2Q9NYQ2 353 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Bscl2Q9Z2E9 383 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm11983V9GXS8 105 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm9573F7C950 1606 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Fam46dB1ATX6 390 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 SelenovD3YXG1 328 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Vmn1r76F8VQ63 324 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 MntO08789 591 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Klc1O88447 541 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ap1g2O88512 791 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cd4P06332 457 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Npr1P18293 1057 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Mdga1Q0PMG2 940 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 CamkmtQ3U2J5 323 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zfp791Q497V9 528 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Grid1Q61627 1009 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Fastkd5Q7TMV3 762 aa21.24■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms