RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Exoc3l1Q8BI71 739 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Pum3Q8BKS9 647 aaKnown RBP7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Pak5Q8C015 719 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Atg16l1Q8C0J2 607 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Tlk1Q8C0V0 766 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Fam118bQ8C569 351 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Apol7cQ8C6E1 369 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Cyp2d26Q8CIM7 500 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Arfip2Q8K221 341 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Cd300ldQ8VCH2 221 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Cpt1bQ924X2 772 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Clstn3Q99JH7 956 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Rpa3Q9CQ71 121 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Bzw1Q9CQC6 419 aaKnown RBP7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Rex1bdQ9CYZ6 169 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Acbd6Q9D061 282 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Spc24Q9D083 201 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Phf6Q9D4J7 364 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Tmem86aQ9D8N3 241 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Znf654Q9DAU9 571 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Sema7aQ9QUR8 664 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Noc2lQ9WV70 747 aaKnown RBP7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 NcdnQ9Z0E0 729 aa7.25□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Scn5aQ9JJV9 2019 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Iqcj-Schip1A0A088MLT8 559 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Vsig10l2A0A140LHF2 776 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Gm12394A2AKP6 982 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Atp8b4A2ANX3 1194 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Spats1A2RRY8 269 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Vmn2r84D3YWE3 849 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Ttc7bE9Q6P5 843 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Hmgxb3G3X9M3 1254 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Rab11fip2G3XA57 512 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Tnfrsf11bO08712 401 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Ptpn9O35239 593 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Hsd3b6O35469 373 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Srpk1O70551 648 aaKnown RBP7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 P01650 108 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Clec2lP0C7M9 211 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Schip1P0DPB4 484 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Tbxas1P36423 533 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Elk3P41971 409 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Ccr1P51675 355 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Ndufs6P52503 116 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Ranbp9P69566 653 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Nrp1P97333 923 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Zbtb14Q08376 449 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Asprv1Q09PK2 339 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 ZbbxQ0P5X5 716 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Mgat3Q10470 538 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Hhipl1Q14DK5 791 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Fam91a1Q3UVG3 837 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Marveld2Q3UZP0 555 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Cfhr2Q4LDF6 332 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Q5XFZ0 217 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Icam5Q60625 917 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Ptk6Q64434 451 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Enpp3Q6DYE8 874 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Rcbtb1Q6NXM2 531 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Acap2Q6ZQK5 770 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Rassf6Q80UQ2 353 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Zc3hav1lQ8BFR1 296 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Slc38a9Q8BGD6 560 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Eif2aQ8BJW6 581 aaKnown RBP7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Pi4kbQ8BKC8 816 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Zbtb49Q8BXX2 756 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Dcun1d2Q8BZJ7 259 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 AA792892Q8C6S1 278 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Flywch1Q8CI03 673 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Scara5Q8K299 491 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Irf2bplQ8K3X4 775 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Prpsap2Q8R574 369 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Ddx39aQ8VDW0 427 aaKnown RBP7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Ppp1r16bQ8VHQ3 568 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Oas3Q8VI93 1138 aaKnown RBP7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Pde6cQ91ZQ1 861 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Q9CPS8 106 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Ndc80Q9D0F1 642 aaKnown RBP7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 PdiltQ9DAN1 588 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Atp13a1Q9EPE9 1200 aaKnown RBP7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Ndufa13Q9ERS2 144 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 ParvbQ9ES46 365 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Spag6Q9JLI7 507 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Fbxo16Q9QZM9 334 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Hao1Q9WU19 370 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Mbd1Q9Z2E2 636 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Crlf3Q9Z2L7 442 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Slc8a3S4R2P9 928 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Znf536Q8K083 1302 aa7.24□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Jmjd1cQ69ZK6 2350 aa7.23□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 B020011L13RikA0A087WQI7 412 aa7.23□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Slfn3A0A1L1STQ7 640 aa7.23□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Gm7086A0A1W2P766 342 aa7.23□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Rhox3cA2AWM0 215 aa7.23□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Tatdn2B7ZNL9 783 aaKnown RBP7.23□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 C7D3YXF5 845 aa7.23□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Gm6205E9PZS2 359 aa7.23□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Gm10719E9Q7T3 227 aa7.23□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Gm10250G3X9L6 160 aaKnown RBP7.23□□□□□ -1.25
Ccdc47-202ENSMUST00000106865 Tekt5G5E8A8 557 aa7.23□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms