RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Bco1Q9JJS6 566 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ap3m1Q9JKC8 418 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 TefQ9JLC6 301 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Azi2Q9QYP6 405 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mtmr9Q9Z2D0 545 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Togaram1Q6A070 1776 aaKnown RBP9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Trbc1A0A0A6YWV4 173 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm43738A0A0G2JEA5 862 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Slfn3A0A1L1STQ7 640 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Man1b1A2AJ15 658 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Fam71dD3YV92 440 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ccdc8D3YZV8 685 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm3099J3QPA5 205 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 ClockO08785 855 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Anxa8O35640 327 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Chil3O35744 398 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tssk2O54863 358 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 TcapO70548 167 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Creg1O88668 220 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 P01852 173 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 ChgbP16014 677 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cdx1P18111 268 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PenkP22005 268 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Fam83hQ148V8 1209 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Wdr70Q3TWF6 657 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Slc2a13Q3UHK1 637 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ankrd42Q3V096 527 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Hephl1Q3V1H3 1159 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tfe3Q64092 572 aaKnown RBP9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gpalpp1Q69ZC8 346 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Exoc3l4Q6DIA2 721 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Wdr91Q7TMQ7 748 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mib1Q80SY4 1006 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tgm6Q8BM11 706 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Qsox1Q8BND5 748 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 AgmoQ8BS35 447 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Aldh5a1Q8BWF0 523 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ldlrad4Q8BWJ4 306 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PdgfcQ8CI19 345 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nt5mQ8VCE6 220 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Oxnad1Q8VE38 311 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr1393Q8VFA7 311 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nde1Q9CZA6 344 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cyb5r3Q9DCN2 301 aaKnown RBP9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pkd2l2Q9JLG4 621 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Spag6Q9JLI7 507 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Git2Q9JLQ2 708 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Frmpd4A2AFR3 1320 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ttc21aQ8C0S4 1314 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Col1a2Q01149 1372 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Klhdc7bA0A286YD60 1263 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PotegA5H0M4 473 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 TmppeD3Z286 447 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cdr1E9Q0B4 517 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 JhyE9Q793 770 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pdzd7E9Q9W7 1021 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm8138F7BY56 213 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm8232F7CFJ3 213 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm7970L7N271 213 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm8122L7N2C7 213 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm7980L7N471 213 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Bub1O08901 1058 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Slc18a3O35304 530 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nudt19P11930 357 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Camk2bP28652 542 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 AcadmP45952 421 aaKnown RBP9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CebpzP53569 1052 aaKnown RBP9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PklrP53657 574 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 LipeP54310 759 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cdh26P59862 763 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Lhx5P61375 402 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ddr1Q03146 911 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tekt4Q149S1 447 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mat2aQ3THS6 395 aaKnown RBP9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ctu2Q3U308 514 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tom1l2Q5SRX1 507 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Il10rbQ61190 349 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Dnajc1Q61712 552 aaKnown RBP9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 BckdhbQ6P3A8 390 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr1288Q7TQY0 312 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Chst14Q80V53 376 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gstm7Q80W21 218 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cep128Q8BI22 1102 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tmem132cQ8CEF9 1099 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cacnb1Q8R3Z5 597 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr283Q8VGU2 309 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ppp1r14aQ91VC7 147 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Basp1Q91XV3 226 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ykt6Q9CQW1 198 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tmem79Q9D709 391 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CsadQ9DBE0 493 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tcirg1Q9JHF5 834 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Trpc2Q9R244 1172 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mpp2Q9WV34 552 aa9.11□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Fpr-rs4A4FUQ5 323 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 4930435E12RikA6X8Z9 381 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm21977F6U3N7 213 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm8020F6WLE9 229 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm6482F6YHC1 213 aa9.1□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm8005F6YKY3 213 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms