RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 TifaQ793I8 184 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 DcakdQ8BHC4 231 aaKnown RBP6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Snx14Q8BHY8 964 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Haus8Q99L00 373 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 PinlypQ9CQD7 212 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ap2b1Q9DBG3 937 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Prl2a1Q9JHK0 228 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Neu2Q9JMH3 379 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 St6galnac4Q9R2B6 360 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mzf1S4R1L6 814 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Brca2P97929 3329 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cacna1eQ61290 2272 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Igkv10-94A0A075B5L1 115 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm13283A0A087WPG5 182 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm3594E9Q2A7 267 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 MttpO08601 894 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 CrymO54983 313 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pim1P06803 397 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Zfp1P08042 402 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Aup1P70295 410 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Trim43aQ3TL54 445 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Defb28Q3V2L0 89 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Afap1l2Q5DTU0 825 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Satb1Q60611 764 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Trpc1Q61056 793 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Phc1Q64028 1012 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam120bQ6RI63 786 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 MroQ7TNB4 248 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 C5ar2Q8BW93 344 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Atg14Q8CDJ3 492 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Snx30Q8CE50 437 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pcdha5Q91Y15 934 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cldn19Q9ET38 224 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gfra4Q9JJT2 260 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 ThegQ9JMB1 375 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Slfn2Q9Z0I6 378 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cog1Q9Z160 980 aa6.93□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pnldc1B2RXZ1 531 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cilp2D3Z7H8 1162 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ptar1E9QAB6 424 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cldn4O35054 210 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Sipa1P46062 1037 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 InhbaQ04998 424 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Kctd21Q3URF8 260 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 WhammQ571B6 793 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Clec4a4Q5YIR8 236 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ddx51Q6P9R1 639 aaKnown RBP6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Olfr366Q7TRY4 309 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mis18bp1Q80WQ8 998 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Znf775Q8BI73 538 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Apol9aQ8VDU3 310 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Retreg1dQ8VE91 480 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Batf3Q9D275 118 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tchhl1Q9D3P1 638 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Htra2Q9JIY5 458 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Atp6v1g2Q9WTT4 118 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 RecqlQ9Z129 648 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Crlf3Q9Z2L7 442 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Myo18aQ9JMH9 2050 aaKnown RBP6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pcna-ps2A0A140T8V5 261 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm29133A0A1B0GT72 266 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dmrta2A2A9A2 531 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tmem235B1AQL3 211 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm5814J3QP80 125 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Casq2O09161 415 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Chrna4O70174 629 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mid1O70583 680 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tlx1P43345 332 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 SmoP56726 793 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tbx4P70325 552 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dab1P97318 588 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fmo3P97501 534 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Q3V0E1 1183 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cyb5d1Q5NCY3 228 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 RasefQ5RI75 627 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rxfp1Q6R6I7 758 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Kansl1Q80TG1 1036 aaKnown RBP6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ofcc1Q8BGX4 166 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 4932411N23RikQ8C0S0 470 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pih1h3bQ8C6P5 218 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Epn2Q8CHU3 595 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Lrrc42Q8R2U7 421 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nae1Q8VBW6 534 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Macrod1Q922B1 323 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Stard13Q923Q2 1113 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 CtsrQ9JIA9 334 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ppm1dQ9QZ67 598 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Adam23Q9R1V7 829 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ror1Q9Z139 937 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Olfr316A0A0N4SVP2 306 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tada2bD3Z4Z0 420 aaKnown RBP6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nsmce4aG3XA30 381 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 AlyrefO08583 255 aaKnown RBP6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 RngttO55236 597 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cd8aP01731 247 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 PrlP06879 226 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 GsnP13020 780 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 PrkchP23298 683 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Msx3P70354 204 aa6.92□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ptprn2P80560 1001 aa6.92□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms