RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
PHGDH-221ENST00000641573 ZFHX4Q86UP3 3567 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 PRR5-ARHGAP8B1AHC4 643 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 ZNF821O75541 412 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-221ENST00000641573 PRLP01236 227 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 SRFP11831 508 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 CREB1P16220 341 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
PHGDH-221ENST00000641573 CA4P22748 312 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 MAPK8P45983 427 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 DGKGP49619 791 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 SERPINB9P50453 376 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 ARHGAP8P85298 464 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 ECT2LQ008S8 904 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 GEN1Q17RS7 908 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 DGKKQ5KSL6 1271 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 TSTD2Q5T7W7 516 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 LGSNQ5TDP6 509 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 ESRP1Q6NXG1 681 aaKnown RBP13.18□□□□□ -0.3
PHGDH-221ENST00000641573 C22orf39Q6P5X5 142 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 NLRP9Q7RTR0 991 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 KCNMB4Q86W47 210 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 C12orf40Q86WS4 652 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 MFSD6LQ8IWD5 586 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 YAF2Q8IY57 180 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 SRRM1Q8IYB3 904 aaKnown RBP13.18□□□□□ -0.3
PHGDH-221ENST00000641573 RYBPQ8N488 228 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-221ENST00000641573 SUMF1Q8NBK3 374 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 LPCAT1Q8NF37 534 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 WFIKKN2Q8TEU8 576 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 MZB1Q8WU39 189 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 ISG20Q96AZ6 181 aaKnown RBP13.18□□□□□ -0.3
PHGDH-221ENST00000641573 PLA2G2FQ9BZM2 168 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 CEP44Q9C0F1 390 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 TNKS2Q9H2K2 1166 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 TRABDQ9H4I3 376 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 ECT2Q9H8V3 914 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 CNOT10Q9H9A5 744 aaKnown RBP13.18□□□□□ -0.3
PHGDH-221ENST00000641573 HPS4Q9NQG7 708 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 TREX1Q9NSU2 369 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 SLC17A6Q9P2U8 582 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 SLC2A6Q9UGQ3 507 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 EVLQ9UI08 416 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-221ENST00000641573 ERVW-1Q9UQF0 538 aa13.18□□□□□ -0.3
PHGDH-221ENST00000641573 MAP1BP46821 2468 aaKnown RBP13.18□□□□□ -0.3
PHGDH-221ENST00000641573 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-221ENST00000641573 A0A1W2PPM1 405 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 TULP3O75386 442 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 PAPSS2O95340 614 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-221ENST00000641573 GSRP00390 522 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 PDHA1P08559 390 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 SNRPAP09012 282 aaKnown RBP13.17□□□□□ -0.3
PHGDH-221ENST00000641573 LAMP2P13473 410 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 BRAFP15056 766 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 PAMP19021 973 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 SNRPD1P62314 119 aaKnown RBP13.17□□□□□ -0.3
PHGDH-221ENST00000641573 PPARDQ03181 441 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 FCHO2Q0JRZ9 810 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 LAMB3Q13751 1172 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 GRM2Q14416 872 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 CNGA3Q16281 694 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 GAB4Q2WGN9 574 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 HSP90AA5PQ58FG0 334 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 TEDDM1Q5T9Z0 273 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 TMEM215Q68D42 235 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 PDPK2PQ6A1A2 396 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 KIAA0930Q6ICG6 404 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-221ENST00000641573 PACS1Q6VY07 963 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 PCDH20Q8N6Y1 951 aaKnown RBP13.17□□□□□ -0.3
PHGDH-221ENST00000641573 OR2AP1Q8NGE2 309 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 OR6K2Q8NGY2 324 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 BLOC1S5Q8TDH9 187 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 PDCD6IPQ8WUM4 868 aaKnown RBP13.17□□□□□ -0.3
PHGDH-221ENST00000641573 NXPE3Q969Y0 559 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 KXD1Q9BQD3 176 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 ARHGEF3Q9NR81 526 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 IARS2Q9NSE4 1012 aaKnown RBP13.17□□□□□ -0.3
PHGDH-221ENST00000641573 SENP1Q9P0U3 644 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 ZFATQ9P243 1243 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 SLCO3A1Q9UIG8 710 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 SPO11Q9Y5K1 396 aa13.17□□□□□ -0.3
PHGDH-221ENST00000641573 MROH6A6NGR9 719 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 TRIM49D1C9J1S8 452 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 LDB2O43679 373 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 FZD6O60353 706 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 KRT38O76015 456 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 VAPBO95292 243 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 MT-ND3P03897 115 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 PRKCGP05129 697 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 PIRTP0C851 137 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 SLC6A11P48066 632 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 ARCN1P48444 511 aaKnown RBP13.16□□□□□ -0.3
PHGDH-221ENST00000641573 BCL2L1Q07817 233 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 DLG2Q15700 870 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 QPCTQ16769 361 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 MYLK3Q32MK0 819 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 ACCSLQ4AC99 568 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 CARD16Q5EG05 197 aa13.16□□□□□ -0.3
PHGDH-221ENST00000641573 ARMC12Q5T9G4 340 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms