RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SPATA31C2B4DYI2 1134 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 INMTO95050 263 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 SLC35E2BP0CK96 405 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 IL10P22301 178 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 ARL4AP40617 200 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 FAM117BQ6P1L5 589 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 OTOP3Q7RTS5 596 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 MFSD6LQ8IWD5 586 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 CLEC4FQ8N1N0 589 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 NLGN2Q8NFZ4 835 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 KHSRPQ92945 711 aaKnown RBP eCLIP13.82□□□□□ -0.2
SCARB2-227ENST00000640957 MAGED4Q96JG8 741 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 SPATA17Q96L03 361 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 RIC8BQ9NVN3 520 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 STYXL1Q9Y6J8 313 aa13.82□□□□□ -0.2
SCARB2-227ENST00000640957 RBBP6Q7Z6E9 1792 aaKnown RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 TRIM24O15164 1050 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 CILPO75339 1184 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 IDO1P14902 403 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 DCKP27707 260 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 PLA2G16P53816 162 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 VBP1P61758 197 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 LAMC2Q13753 1193 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 INSCQ1MX18 579 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 ZNF789Q5FWF6 425 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 RWDD4Q6NW29 188 aaKnown RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 ZYG11AQ6WRX3 759 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 R3HCC1LQ7Z5L2 792 aaKnown RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 STK32CQ86UX6 486 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 CNTD1Q8N815 330 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 HEXDCQ8WVB3 486 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 RTP4Q96DX8 246 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 DHRS1Q96LJ7 313 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 SUCOQ9UBS9 1254 aaKnown RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 INVSQ9Y283 1065 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 TCRBV3S1A0A5B6 114 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 FAM72CH0Y354 149 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 MT-CYBP00156 380 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 TXNP10599 105 aaKnown RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 PRKACGP22612 351 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 PSMA4P25789 261 aaKnown RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 SELENBP1Q13228 472 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 FAM72AQ5TYM5 149 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 FKBP1CQ5VVH2 108 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 IQSEC1Q6DN90 963 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 FAM72DQ6L9T8 149 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 FAM72BQ86X60 149 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 OR6B3Q8NGW1 331 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 APBB2Q92870 758 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 GLMNQ92990 594 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 QKIQ96PU8 341 aaKnown RBP eCLIP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 MRPL45Q9BRJ2 306 aaKnown RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 SMURF2Q9HAU4 748 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 PDGFCQ9NRA1 345 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 U3KQV3 271 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 ANKRD31Q8N7Z5 1873 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 LINC00854A0A1B0GVQ3 168 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 SOBPA7XYQ1 873 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 TMEM114B3SHH9 223 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 SLC4A1P02730 911 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 IQCF3P0C7M6 154 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 CCNA1P78396 465 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 VGLL4Q14135 290 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 LAPTM4AQ15012 233 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 INAQ16352 499 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 SLC36A3Q495N2 470 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 CYBRD1Q53TN4 286 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 STEAP4Q687X5 459 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 PCYOX1LQ8NBM8 494 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 SH3YL1Q96HL8 342 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 HBEGFQ99075 208 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 FUNDC2Q9BWH2 189 aa13.81□□□□□ -0.2
SCARB2-227ENST00000640957 EIF2AQ9BY44 585 aaKnown RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 CPSF3Q9UKF6 684 aaKnown RBP13.81□□□□□ -0.2
SCARB2-227ENST00000640957 KPNA4O00629 521 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 BCAS1O75363 584 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 HSPA8P11142 646 aaKnown RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 MYF6P23409 242 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 ADSLP30566 484 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 TAS2R39P59534 338 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 OCA2Q04671 838 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 KCTD2Q14681 263 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 RPS6KA2Q15349 733 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 SURF1Q15526 300 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 RBM20Q5T481 1227 aaKnown RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 RDM1Q8NG50 284 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 NDNFQ8TB73 568 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 SH3RF2Q8TEC5 729 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 ZNF385DQ9H6B1 395 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 LRRC40Q9H9A6 602 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 PALMDQ9NP74 551 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 MORF4L1Q9UBU8 362 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 IPO11Q9UI26 975 aaKnown RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 ACOT9Q9Y305 439 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 A0A087WZ62 844 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 TNPO2O14787 897 aaKnown RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 XPNPEP2O43895 674 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 SIX3O95343 332 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms