RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 PRLP01236 227 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 TRBC1P01850 177 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 ELFN1P0C7U0 828 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 RPL22P35268 128 aaKnown RBP15.28■□□□□ 0.04
PAX6-268ENST00000640287 HNF1BP35680 557 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 MMP12P39900 470 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 TERF1P54274 439 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 BASP1P80723 227 aaKnown RBP15.28■□□□□ 0.04
PAX6-268ENST00000640287 ARHGEF7Q14155 803 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 SPARCL1Q14515 664 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 WDR45BQ5MNZ6 344 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 SEL1L3Q68CR1 1132 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 DENND2CQ68D51 928 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 C4orf22Q6V702 233 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 DPPA4Q7L190 304 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 HORMAD1Q86X24 394 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 SLC41A1Q8IVJ1 513 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 KLK6Q92876 244 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 BIRC7Q96CA5 298 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 SCRN2Q96FV2 425 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 TRIB3Q96RU7 358 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 APOL2Q9BQE5 337 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 ETNK1Q9HBU6 452 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.28■□□□□ 0.04
PAX6-268ENST00000640287 VPS13AQ96RL7 3174 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 NUMA1Q14980 2115 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 PLXND1Q9Y4D7 1925 aa15.28■□□□□ 0.04
PAX6-268ENST00000640287 CAPN8A6NHC0 703 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 METTL12A8MUP2 240 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 MMP20O60882 483 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 AGTP01019 485 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 HLA-DPA1P20036 260 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 VIPR1P32241 457 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 NBL1P41271 181 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 CCR5P51681 352 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 CREB5Q02930 508 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 C2orf54Q08AI8 447 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 GPS1Q13098 491 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 SGCGQ13326 291 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 QPCTQ16769 361 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 WHAMMP3Q1A5X7 153 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 SETMARQ53H47 684 aaPredicted RBP15.27■□□□□ 0.04
PAX6-268ENST00000640287 DNTTIP2Q5QJE6 756 aaKnown RBP15.27■□□□□ 0.04
PAX6-268ENST00000640287 TRIM69Q86WT6 500 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.04
PAX6-268ENST00000640287 SPATA4Q8NEY3 305 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 SMIM14Q96QK8 99 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 KRT12Q99456 494 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 TBL1YQ9BQ87 522 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 LRRC40Q9H9A6 602 aa15.27■□□□□ 0.04
PAX6-268ENST00000640287 TPX2Q9ULW0 747 aaKnown RBP15.27■□□□□ 0.04
PAX6-268ENST00000640287 LOC285095A0A1B0GVY8 99 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 IGLON5A6NGN9 336 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 NPIPB15A6NHN6 443 aaPredicted RBP15.27■□□□□ 0.03
PAX6-268ENST00000640287 ESPNB1AK53 854 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 PSMD3O43242 534 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 LZTS3O60299 673 aaPredicted RBP15.27■□□□□ 0.03
PAX6-268ENST00000640287 USP12O75317 370 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 EPOP01588 193 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 SLC4A1P02730 911 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 IGHV4-34P06331 123 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 APRTP07741 180 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 PIRTP0C851 137 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 C6P13671 934 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 ITPKAP23677 461 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 MAOBP27338 520 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 LIG3P49916 1009 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 DR1Q01658 176 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 OLIG2Q13516 323 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 TUBB2AQ13885 445 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 PTPRRQ15256 657 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 SLC1A5Q15758 541 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 TMEM52BQ4KMG9 183 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 SIRPB2Q5JXA9 342 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 CYP2U1Q7Z449 544 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 MCCC1Q96RQ3 725 aaPredicted RBP15.27■□□□□ 0.03
PAX6-268ENST00000640287 TUBB2BQ9BVA1 445 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 SEMA4AQ9H3S1 761 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 ASIC3Q9UHC3 531 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 PCYOX1Q9UHG3 505 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 EIF2B4Q9UI10 523 aaKnown RBP15.27■□□□□ 0.03
PAX6-268ENST00000640287 ZFR2Q9UPR6 939 aaKnown RBP15.27■□□□□ 0.03
PAX6-268ENST00000640287 MRFAP1Q9Y605 127 aa15.27■□□□□ 0.03
PAX6-268ENST00000640287 ATXN2Q99700 1313 aaKnown RBP15.26■□□□□ 0.03
PAX6-268ENST00000640287 C1orf232A0A0U1RR37 186 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 GOLGA8CPA6NN73 597 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 ERI2A8K979 691 aaKnown RBP15.26■□□□□ 0.03
PAX6-268ENST00000640287 SLC31A1O15431 190 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 TM7SF2O76062 418 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 AP2A1O95782 977 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 FGF1P05230 155 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 ATXN1LP0C7T5 689 aaKnown RBP15.26■□□□□ 0.03
PAX6-268ENST00000640287 CHRNA4P43681 627 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 RALGDSQ12967 914 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 SEMA5AQ13591 1074 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 ACOX1Q15067 660 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 ZNF284Q2VY69 593 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 LRRC66Q68CR7 880 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 LAIR1Q6GTX8 287 aa15.26■□□□□ 0.03
PAX6-268ENST00000640287 NAPEPLDQ6IQ20 393 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms