RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 UTP11Q9Y3A2 253 aaKnown RBP6.78□□□□□ -1.32
UPF3B-205ENST00000636792 PPIL1Q9Y3C6 166 aa6.78□□□□□ -1.32
UPF3B-205ENST00000636792 PCDHGC4Q9Y5F7 938 aa6.78□□□□□ -1.32
UPF3B-205ENST00000636792 HRH3Q9Y5N1 445 aa6.78□□□□□ -1.32
UPF3B-205ENST00000636792 ATG2BQ96BY7 2078 aa6.78□□□□□ -1.32
UPF3B-205ENST00000636792 EML5Q05BV3 1969 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 EFCAB8A8MWE9 144 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 TTC34A8MYJ7 566 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 PSMD11O00231 422 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 TRAFD1O14545 582 aaPredicted RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 SMAD6O43541 496 aaKnown RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 FZD6O60353 706 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 GPR37L1O60883 481 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 SIN3BO75182 1162 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 SLU7O95391 586 aaKnown RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 APBB3O95704 486 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 AP2A1O95782 977 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 MT-CO1P00395 513 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 CPP00450 1065 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 IFNB1P01574 187 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 KRT14P02533 472 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 ZNF30P17039 623 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 NFKB1P19838 968 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 MCM3P25205 808 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 OXTRP30559 389 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 CD68P34810 354 aaPredicted RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 CXCL12P48061 93 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 SCNN1BP51168 640 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 COPAP53621 1224 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 GDF10P55107 478 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 SEC13P55735 322 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 PDE1BQ01064 536 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 SATB1Q01826 763 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 CALCOCO2Q13137 446 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 MORF4L2Q15014 288 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 LLGL1Q15334 1064 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 CST6Q15828 149 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 RSPO4Q2I0M5 234 aaPredicted RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 ZNF528Q3MIS6 628 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 C2orf27AQ580R0 203 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 CFAP58Q5T655 872 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 ARMC12Q5T9G4 340 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 KCTD11Q693B1 232 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 NEK5Q6P3R8 708 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 GDPD4Q6W3E5 623 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 USP45Q70EL2 814 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 PPIL6Q8IXY8 311 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 PGBD5Q8N414 524 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 FLCNQ8NFG4 579 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 TSTD1Q8NFU3 115 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 PIP4K2CQ8TBX8 421 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 RHBDD1Q8TEB9 315 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 SORCS1Q8WY21 1168 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 SEC14L1Q92503 715 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 PRCCQ92733 491 aaPredicted RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 LRRC39Q96DD0 335 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 SNF8Q96H20 258 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 ZNF419Q96HQ0 510 aaPredicted RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 AGAP3Q96P47 875 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 NECAB3Q96P71 396 aaPredicted RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 MCCC1Q96RQ3 725 aaPredicted RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 HDAC8Q9BY41 377 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 TM6SF2Q9BZW4 377 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 FOXQ1Q9C009 403 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 CDH19Q9H159 772 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 KCNH6Q9H252 994 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 ZDHHC6Q9H6R6 413 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 XAB2Q9HCS7 855 aaKnown RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 PREBQ9HCU5 417 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 SEPT10Q9P0V9 454 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 WHRNQ9P202 907 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 USP36Q9P275 1121 aaKnown RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 HECAQ9UBI9 543 aaPredicted RBP6.77□□□□□ -1.33
UPF3B-205ENST00000636792 ASIC3Q9UHC3 531 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 PPM1HQ9ULR3 514 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 NCKAP1Q9Y2A7 1128 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 PLXNA2O75051 1894 aa6.77□□□□□ -1.33
UPF3B-205ENST00000636792 LOC285095A0A1B0GVY8 99 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 TCRBV21S2A2A0A5A6 115 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 CAPN8A6NHC0 703 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 UPK3BL1B0FP48 263 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 UPK3BL2E5RIL1 263 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 E7EVH7 732 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 K7ERQ8 282 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 DNALI1O14645 258 aaPredicted RBP6.76□□□□□ -1.33
UPF3B-205ENST00000636792 MUSKO15146 869 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 EIF3HO15372 352 aaKnown RBP eCLIP6.76□□□□□ -1.33
UPF3B-205ENST00000636792 LAMTOR5O43504 91 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 PPFIA2O75334 1257 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 LEFTY1O75610 366 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 SEC31AO94979 1220 aaKnown RBP6.76□□□□□ -1.33
UPF3B-205ENST00000636792 PGLSO95336 258 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 NDST3O95803 873 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 MMP2P08253 660 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ACADMP11310 421 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ITIH2P19823 946 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 CD72P21854 359 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 PSMB4P28070 264 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 CNR2P34972 360 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 RPL22P35268 128 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms