RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CLOCKO15516 846 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 PTNP21246 168 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 SLC6A3Q01959 620 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 SP2Q02086 613 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 CTBP1Q13363 440 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 SNX20Q7Z614 316 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 PHF10Q8WUB8 498 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 MIPP30301 263 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 SSR2P43308 183 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 KYQ8NBH2 561 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 SLC4A11Q8NBS3 891 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ATP6AP2A0A1C7CYW4 349 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ARHGEF33A8MVX0 844 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 F8VP50 259 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ATP6AP2O75787 350 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 BPNT1O95861 308 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 MED22Q15528 200 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 SLC26A11Q86WA9 606 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 NELL1Q92832 810 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 EPS8L2Q9H6S3 715 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 PCDHB11Q9Y5F2 797 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 LAMC1P11047 1609 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 A0A0G2JN53 185 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 CES1P23141 567 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 KCNA10Q16322 511 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ATG14Q6ZNE5 492 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ZNF606Q8WXB4 792 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 FAM84AQ96KN4 292 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 MTMR9Q96QG7 549 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 BDH2Q9BUT1 245 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 CLPTM1O96005 669 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 LDLRP01130 860 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 CRABP2P29373 138 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ARHGAP36Q6ZRI8 547 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 C3orf20Q8ND61 904 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ROPN1BQ9BZX4 212 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ROPN1Q9HAT0 212 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 GIT1Q9Y2X7 761 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 SPEF1Q9Y4P9 236 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 AKAP3O75969 853 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 ZNF846Q147U1 533 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 XKR4Q5GH76 650 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 SLC25A36Q96CQ1 311 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 TPP2P29144 1249 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 RPL10LQ96L21 214 aaKnown RBP17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 EVLQ9UI08 416 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 PAPSS1O43252 624 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 PRKCGP05129 697 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 FAM46CQ5VWP2 391 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 ZNF613Q6PF04 617 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 FRRS1Q6ZNA5 592 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 TSHZ1Q6ZSZ6 1077 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 SLC22A15Q8IZD6 547 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 DCBLD1Q8N8Z6 715 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 IL12RB2Q99665 862 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 EBPLQ9BY08 206 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 ELAC1Q9H777 363 aaKnown RBP17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 FAM227AF5H4B4 570 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 FLT3LGP49771 235 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 USP4Q13107 963 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 TREML2Q5T2D2 321 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 NYAP1Q6ZVC0 841 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 ZNF720Q7Z2F6 126 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 RIBC1Q8N443 379 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 ZDHHC15Q96MV8 337 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 TBCBQ99426 244 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 UGT2B28Q9BY64 529 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 RGS17Q9UGC6 210 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 CHD1O14646 1710 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 IL33O95760 270 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 FTH1P02794 183 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 CCNB1P14635 433 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 MYL9P24844 172 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 RPL22P35268 128 aaKnown RBP17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 MYBPC2Q14324 1141 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 SMCO1Q147U7 214 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 NDUFA5Q16718 116 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 LDB1Q86U70 411 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 METTL27Q8N6F8 245 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 SGCDQ92629 289 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 PDCD2LQ9BRP1 358 aa17.89■□□□□ 0.45
CACNA1A-227ENST00000636549 F8VZ95 297 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 GRIA3P42263 894 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 TC2NQ8N9U0 490 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 SLC38A2Q96QD8 506 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 ABCB10Q9NRK6 738 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 HCN3Q9P1Z3 774 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 EGFL7Q9UHF1 273 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 A0A087X1B8 175 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 PRKCHP24723 683 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 MSX2P35548 267 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 UGT2B15P54855 530 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 HSPB3Q12988 150 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 TEAD4Q15561 434 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 PERM1Q5SV97 790 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 NUAK2Q9H093 628 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 NUP50Q9UKX7 468 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 OAS3Q9Y6K5 1087 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 QRICH2Q9H0J4 1663 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms