RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 HTATIP2Q9BUP3 242 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 SIL1Q9H173 461 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 CDCP1Q9H5V8 836 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 EPHX3Q9H6B9 360 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 SH2D4AQ9H788 454 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 KAT14Q9H8E8 782 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 SAP30LQ9HAJ7 183 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 CD93Q9NPY3 652 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 EHD2Q9NZN4 543 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 SLC25A13Q9UJS0 675 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 COG5Q9UP83 839 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 POLR1AO95602 1720 aaPredicted RBP3.38□□□□□ -1.87
VPS8-228ENST00000628962 EP400Q96L91 3159 aa3.38□□□□□ -1.87
VPS8-228ENST00000628962 SCN5AQ14524 2016 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 ATRNO75882 1429 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 NPIPB13A6NJU9 1138 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 NPIPB5A8MRT5 1133 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 TEX22C9J3V5 150 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 NPIPB4C9JG80 1138 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 H7C0S8 307 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 HBP1O60381 514 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 ERAL1O75616 437 aaKnown RBP3.37□□□□□ -1.87
VPS8-228ENST00000628962 PLAUP00749 431 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 ADRB2P07550 413 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 CD63P08962 238 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 TMIGD3P0DMS9 266 aaPredicted RBP3.37□□□□□ -1.87
VPS8-228ENST00000628962 ICAM3P32942 547 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 ACSL1P33121 698 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 HNF1BP35680 557 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 DPP6P42658 865 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 RPS6KA3P51812 740 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 MVDP53602 400 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 P2RX3P56373 397 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 RPL36AP83881 106 aaKnown RBP3.37□□□□□ -1.87
VPS8-228ENST00000628962 DEUP1Q05D60 604 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 PPATQ06203 517 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 LTBQ06643 244 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 CCDC15Q0P6D6 951 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 ODF3L2Q3SX64 289 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 SLC9B1Q4ZJI4 515 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 TMEM88Q6PEY1 159 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 NCEH1Q6PIU2 408 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 FAM57BQ71RH2 274 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 VPS52Q8N1B4 723 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 ENDOVQ8N8Q3 282 aaKnown RBP3.37□□□□□ -1.87
VPS8-228ENST00000628962 PNPLA1Q8N8W4 532 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 SRFBP1Q8NEF9 429 aaKnown RBP3.37□□□□□ -1.87
VPS8-228ENST00000628962 GLMPQ8WWB7 406 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 POMGNT1Q8WZA1 660 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 NCSTNQ92542 709 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 MSI2Q96DH6 328 aaKnown RBP3.37□□□□□ -1.87
VPS8-228ENST00000628962 NPAS1Q99742 590 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 ELOVL1Q9BW60 279 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 TM2D2Q9BX73 214 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 NPLQ9BXD5 320 aaPredicted RBP3.37□□□□□ -1.87
VPS8-228ENST00000628962 TRIM31Q9BZY9 425 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 TTC12Q9H892 705 aaPredicted RBP3.37□□□□□ -1.87
VPS8-228ENST00000628962 USP29Q9HBJ7 922 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 MLXIPLQ9NP71 852 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 IL1RAPL1Q9NZN1 696 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 MSRB1Q9NZV6 116 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 KLQ9UEF7 1012 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 FZD4Q9ULV1 537 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 PASKQ96RG2 1323 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 DIP2AQ14689 1571 aa3.37□□□□□ -1.87
VPS8-228ENST00000628962 IQGAP1P46940 1657 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 CLTCQ00610 1675 aaKnown RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 CKAP5Q14008 2032 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 CYP3A7-CYP3A51PA0A087WV96 503 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 A0A1W2PQ09 198 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 RRHO14718 337 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 LINC01565O15544 149 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 TGFB1I1O43294 461 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 CAMTA2O94983 1202 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 PGM3O95394 542 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 HSPA4LO95757 839 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 NR2F1P10589 423 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 RARGP13631 454 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 ARSAP15289 507 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 SAT1P21673 171 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 PRPH2P23942 346 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 CYP3A7P24462 503 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 CALRP27797 417 aaKnown RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 SLC8A1P32418 973 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 PBX3P40426 434 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 JAK3P52333 1124 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 RRP1P56182 461 aaKnown RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 OLR1P78380 273 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 PRAMEP78395 509 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 RAE1P78406 368 aaKnown RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 EFNB1P98172 346 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 TMEM115Q12893 351 aaPredicted RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 DNASE1L3Q13609 305 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 BYSLQ13895 437 aaKnown RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 PFKFB3Q16875 520 aaPredicted RBP3.36□□□□□ -1.87
VPS8-228ENST00000628962 AP5B1Q2VPB7 878 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 BMP2KLQ5H9B9 411 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 SH2D4BQ5SQS7 431 aa3.36□□□□□ -1.87
VPS8-228ENST00000628962 PLEKHS1Q5SXH7 462 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms