RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 RHOBTB2Q9BYZ6 727 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 SLC39A8Q9C0K1 460 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 ZCWPW1Q9H0M4 648 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 TASP1Q9H6P5 420 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 CATSPERBQ9H7T0 1116 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 MEAF6Q9HAF1 191 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 TCF7L2Q9NQB0 619 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 HACD3Q9P035 362 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 PDP2Q9P2J9 529 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 CNOT11Q9UKZ1 510 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 PCDHB8Q9UN66 801 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 SCML2Q9UQR0 700 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 LAMA2P24043 3122 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 AHCYL1O43865 530 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 OAZ2O95190 189 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 JCHAINP01591 159 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 HLA-DQB2P05538 268 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 PIK3R1P27986 724 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 ATP6V1E1P36543 226 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 GRIA4P48058 902 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 ATP4BP51164 291 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 DSC1Q08554 894 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 TUSC3Q13454 348 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 GEN1Q17RS7 908 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 LSM12Q3MHD2 195 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 PGAM4Q8N0Y7 254 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 RNF148Q8N7C7 305 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 GPR150Q8NGU9 434 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 HASPINQ8TF76 798 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 TOP1MTQ969P6 601 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 L3HYPDHQ96EM0 354 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 RETREG1Q9H6L5 497 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 AGO3Q9H9G7 860 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 SPATS2LQ9NUQ6 558 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 TBC1D13Q9NVG8 400 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 TMEM248Q9NWD8 314 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 C6orf203Q9P0P8 240 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 ZDHHC2Q9UIJ5 367 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 PADI3Q9ULW8 664 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 TLR6Q9Y2C9 796 aa7.22□□□□□ -1.25
CTNNA1-244ENST00000627109 TK2O00142 265 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 ACOT8O14734 319 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 PAGE1O75459 146 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 BPNT1O95861 308 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 CHRNGP07510 517 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 TFEBP19484 476 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 TCN1P20061 433 aaPredicted RBP7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 IRX1P78414 480 aaPredicted RBP7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 USP10Q14694 798 aaKnown RBP7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 ARL13AQ5H913 290 aaPredicted RBP7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 HACD2Q6Y1H2 254 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 FAM126BQ8IXS8 530 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 DEFB107AQ8IZN7 70 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 PHC3Q8NDX5 983 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 HMGCLL1Q8TB92 370 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 RNF217Q8TC41 542 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 SEPT8Q92599 483 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 MOCOSQ96EN8 888 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 FCRL2Q96LA5 508 aaPredicted RBP7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 C8orf48Q96LL4 319 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 LENG8Q96PV6 779 aaPredicted RBP7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 FTHL17Q9BXU8 183 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 SLC25A51Q9H1U9 297 aa7.21□□□□□ -1.25
CTNNA1-244ENST00000627109 PRSS51A0A1B0GVH4 220 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 LOC285095A0A1B0GVY8 99 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 DRGXA6NNA5 263 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 H0YJX3 145 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 PHGDHO43175 533 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 MAP3K13O43283 966 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 LYNP07948 512 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 MPSTP25325 297 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 SLC1A2P43004 574 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 PGFP49763 221 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 SCNN1GP51170 649 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 PGGT1BP53609 377 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 MLLT6P55198 1093 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 IHHQ14623 411 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 TRIP10Q15642 601 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 SEL1L3Q68CR1 1132 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 TRAF7Q6Q0C0 670 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 C16orf89Q6UX73 402 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 PIWIL4Q7Z3Z4 852 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 NPAS4Q8IUM7 802 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 PGBD3Q8N328 593 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 SPATA6LQ8N4H0 392 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 IPMKQ8NFU5 416 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 IPCEF1Q8WWN9 437 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 TIFAQ96CG3 184 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 UHRF1Q96T88 793 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 OMDQ99983 421 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 ATXN3LQ9H3M9 355 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 POPDC3Q9HBV1 291 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 UBAP1Q9NZ09 502 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 RIMS3Q9UJD0 308 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 TSR3Q9UJK0 312 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 HS3ST4Q9Y661 456 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 ARHGEF37A1IGU5 675 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 EME2A4GXA9 379 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 TCAF2A6NFQ2 919 aa7.21□□□□□ -1.26
CTNNA1-244ENST00000627109 SDHDO14521 159 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms