RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SPATS2Q86XZ4 545 aaKnown RBP14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 DCP2Q8IU60 420 aaKnown RBP14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 LRRC57Q8N9N7 239 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 RHBDD1Q8TEB9 315 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 TFB1MQ8WVM0 346 aaKnown RBP14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 NSMCE3Q96MG7 304 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 CAMK1GQ96NX5 476 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 OLFM3Q96PB7 478 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 KLF6Q99612 283 aaPredicted RBP14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 CEP41Q9BYV8 373 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 ERVMER34-1Q9H9K5 563 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 B4GALT6Q9UBX8 382 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 PHTF1Q9UMS5 762 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 GUCA1BQ9UMX6 200 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 RAI2Q9Y5P3 530 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 ADGRG1Q9Y653 693 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 TMEM131Q92545 1883 aa14.05□□□□□ -0.16
PCDHGC3-208ENST00000622836 TP53BP1Q12888 1972 aaPredicted RBP14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 MED19A0JLT2 244 aaPredicted RBP14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 GOLGA8CPA6NN73 597 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 PCDHGA12O60330 932 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 FTCDO95954 541 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 CCDC175P0C221 793 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 CD86P42081 329 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 GRK6P43250 576 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 SIM1P81133 766 aaPredicted RBP14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 PDE1CQ14123 709 aaPredicted RBP14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 LRRC14Q15048 493 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 ACOX1Q15067 660 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 NT5DC3Q86UY8 548 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 GATAD2AQ86YP4 633 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 LRRC8AQ8IWT6 810 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 ANP32BQ92688 251 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 BMFQ96LC9 184 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 AGAP3Q96P47 875 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 OSBPL8Q9BZF1 889 aa14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 PACSIN2Q9UNF0 486 aaPredicted RBP14.04□□□□□ -0.16
PCDHGC3-208ENST00000622836 DNAH14Q0VDD8 3507 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 SPAARA0A1B0GVQ0 90 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 MIF4GDA9UHW6 222 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 H7C0C1 242 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 SDC3O75056 442 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 PCCBP05166 539 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 CTPS1P17812 591 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 EPHA8P29322 1005 aaPredicted RBP14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 VIPR1P32241 457 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 IGFALSP35858 605 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 ATP5OP48047 213 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 ADCY2Q08462 1091 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 NIPAL4Q0D2K0 466 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 RALGDSQ12967 914 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 ARHGEF7Q14155 803 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 PTK2BQ14289 1009 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 IRF4Q15306 451 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 TRIP6Q15654 476 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 N4BP2L1Q5TBK1 243 aaPredicted RBP14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 ALG1LQ6GMV1 187 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 LIPIQ6XZB0 460 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 BBS12Q6ZW61 710 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 RNF10Q8N5U6 811 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 TP53I13Q8NBR0 393 aaPredicted RBP14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 LPCAT1Q8NF37 534 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 CENPTQ96BT3 561 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 IL12RB2Q99665 862 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 FERMT1Q9BQL6 677 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 TDRD1Q9BXT4 1180 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 MBNL1Q9NR56 388 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 DNAJC28Q9NX36 388 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 PCOLCE2Q9UKZ9 415 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 CHKBQ9Y259 395 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 CAPN6Q9Y6Q1 641 aa14.03□□□□□ -0.16
PCDHGC3-208ENST00000622836 CFAP69A5D8W1 941 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 NPIPB15A6NHN6 443 aaPredicted RBP14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 APOC4-APOC2K7ER74 178 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 MTSS1O43312 755 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 RECQL5O94762 991 aaPredicted RBP14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 TJP3O95049 919 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 APOC2P02655 101 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 PDHA1P08559 390 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 ALPIP09923 528 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 RXRGP48443 463 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 PEX5P50542 639 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 BNIP3Q12983 259 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 ZNF211Q13398 564 aaPredicted RBP14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 PRKD1Q15139 912 aaPredicted RBP14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 WSCD2Q2TBF2 565 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 HS1BP3Q53T59 392 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 ZNF542PQ5EBM4 170 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 FAM182AQ5T1J6 154 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 KDM7AQ6ZMT4 941 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 PARGQ86W56 976 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 SLC22A18ASQ8N1D0 253 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 CNTD1Q8N815 330 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 ARRDC2Q8TBH0 407 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 SAP25Q8TEE9 199 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 SPOCK2Q92563 424 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 ALG3Q92685 438 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 SCRN2Q96FV2 425 aa14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 RBM15Q96T37 977 aaKnown RBP eCLIP14.02□□□□□ -0.17
PCDHGC3-208ENST00000622836 CDC6Q99741 560 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms