RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CCSAPQ6IQ19 270 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 C14orf80Q86SX3 495 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 MFSD6LQ8IWD5 586 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 TMEFF1Q8IYR6 380 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 RBFAQ8N0V3 343 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 LCN9Q8WX39 176 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 NTAN1Q96AB6 310 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 NUS1Q96E22 293 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 PHF21BQ96EK2 531 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 KCNF1Q9H3M0 494 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 ZNF334Q9HCZ1 680 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 CIDEBQ9UHD4 219 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 H0Y858 1186 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 J3KR12 359 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 KPNA5O15131 536 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 ADH1BP00325 375 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 GJA4P35212 333 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 CDC16Q13042 620 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 TRIM71Q2Q1W2 868 aaKnown RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 DPY19L3Q6ZPD9 716 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 TRMT10CQ7L0Y3 403 aaKnown RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 PRSS58Q8IYP2 241 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 ZNF655Q8N720 491 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 Q8N9G6 341 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 HSPA12BQ96MM6 686 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 ACOX2Q99424 681 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 CWH43Q9H720 699 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 TRIM45Q9H8W5 580 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 CNOT10Q9H9A5 744 aaKnown RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 EIF2B4Q9UI10 523 aaKnown RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 CDH22Q9UJ99 828 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 PHTF1Q9UMS5 762 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 ARIH1Q9Y4X5 557 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 CUL9Q8IWT3 2517 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 AKAP11Q9UKA4 1901 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 PMM2O15305 246 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 CHADO15335 359 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 LEFTY1O75610 366 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 SEMA4FO95754 770 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 ALPIP09923 528 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 HPGDP15428 266 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 CXCR3P49682 368 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 MAGOHP61326 146 aaKnown RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 BRAT1Q6PJG6 821 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 TMEM220Q6QAJ8 160 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 RHBDD1Q8TEB9 315 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 TLR10Q9BXR5 811 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 OSBPL1AQ9BXW6 950 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 SLC25A51Q9H1U9 297 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 CXCL16Q9H2A7 254 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 SIX2Q9NPC8 291 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 PPARGC1AQ9UBK2 798 aaKnown RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 MARCOQ9UEW3 520 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-229ENST00000622668 DCTN4Q9UJW0 460 aa9.12□□□□□ -0.95
HDAC9-229ENST00000622668 ADAMTS7Q9UKP4 1686 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ANKDD1BA6NHY2 528 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 MEFVO15553 781 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 SDC3O75056 442 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 JUPP14923 745 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 MAOBP27338 520 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 SSTR1P30872 391 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 RPL22P35268 128 aaKnown RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 CASP8Q14790 479 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ERN2Q76MJ5 926 aaKnown RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ZCCHC9Q8N567 271 aaKnown RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 OR4L1Q8NH43 312 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 NPY6RQ99463 290 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 SLC2A11Q9BYW1 496 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 FOXQ1Q9C009 403 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 RC3H2Q9HBD1 1191 aaKnown RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 MUTYHQ9UIF7 546 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 GRID1Q9ULK0 1009 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 APOBEC2Q9Y235 224 aaKnown RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 CACNA1HO95180 2353 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 TTC34A8MYJ7 566 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 PRMT5O14744 637 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 NDUFB5O43674 189 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 MTX2O75431 263 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 TNFP01375 233 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 KRT4P19013 534 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 KRT20P35900 424 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 PLK1P53350 603 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ADAM17P78536 824 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 CDK16Q00536 496 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 IRF8Q02556 426 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 RING1Q06587 406 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 IFT88Q13099 833 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 TOMM20Q15388 145 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 PIK3R6Q5UE93 754 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 LYSMD4Q5XG99 296 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 RTL10Q7L3V2 364 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 WDR48Q8TAF3 677 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 HDAC7Q8WUI4 952 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ASZ1Q8WWH4 475 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 TTYH3Q9C0H2 523 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 MYH11P35749 1972 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 UPK3BL1B0FP48 263 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 WASH3PC4AMC7 463 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 UPK3BL2E5RIL1 263 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 KHNYNO15037 678 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms