RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 VWA5B1Q5TIE3 1220 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 HIPK4Q8NE63 616 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 PPTC7Q8NI37 304 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 DOK1Q99704 481 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 C1orf21Q9H246 121 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 WASH6PQ9NQA3 447 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 ANLNQ9NQW6 1124 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 IL20Q9NYY1 176 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 KLK14Q9P0G3 267 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 DCDC2Q9UHG0 476 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 GTF2IRD1Q9UHL9 959 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 MYO18AQ92614 2054 aaKnown RBP12.53□□□□□ -0.4
LITAF-221ENST00000622633 TRIM64BA6NI03 449 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 H6PDO95479 791 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 PROCP04070 461 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 CYP2C8P10632 490 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 TGM1P22735 817 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 TYK2P29597 1187 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 GTF2A2P52657 109 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 RALGPS1Q5JS13 557 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 PERM1Q5SV97 790 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 CATSPER4Q7RTX7 472 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 BTLAQ7Z6A9 289 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 LRRC52Q8N7C0 313 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 ATXN7L3BQ96GX2 97 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 SORT1Q99523 831 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 ZNF717Q9BY31 904 aaPredicted RBP12.53□□□□□ -0.4
LITAF-221ENST00000622633 NXF3Q9H4D5 531 aaKnown RBP12.53□□□□□ -0.4
LITAF-221ENST00000622633 GPBP1L1Q9HC44 474 aaPredicted RBP12.53□□□□□ -0.4
LITAF-221ENST00000622633 SETD4Q9NVD3 440 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 STMN3Q9NZ72 180 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 SOX13Q9UN79 622 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 ARHGAP26Q9UNA1 814 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 ATP5BP06576 529 aaKnown RBP12.52□□□□□ -0.4
LITAF-221ENST00000622633 SLC26A3P40879 764 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 MATKP42679 507 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 SMARCB1Q12824 385 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 SHEQ5VZ18 495 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 GALNT18Q6P9A2 607 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 STRADAQ7RTN6 431 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 CMC1Q7Z7K0 106 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 ADAMTSL2Q86TH1 951 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 KBTBD6Q86V97 674 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 ZNF567Q8N184 647 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 CRYBG2Q8N1P7 616 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 PQLC1Q8N2U9 271 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 RNF139Q8WU17 664 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 TRIB2Q92519 343 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 FCRL3Q96P31 734 aaPredicted RBP12.52□□□□□ -0.4
LITAF-221ENST00000622633 SERHL2Q9H4I8 314 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 PRDM12Q9H4Q4 367 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 UBA2Q9UBT2 640 aaPredicted RBP12.52□□□□□ -0.4
LITAF-221ENST00000622633 MAFFQ9ULX9 164 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 DERAQ9Y315 318 aa12.52□□□□□ -0.4
LITAF-221ENST00000622633 BRCA1P38398 1863 aaKnown RBP12.52□□□□□ -0.41
LITAF-221ENST00000622633 C1orf232A0A0U1RR37 186 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 H3BNH8 94 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 KCNK1O00180 336 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 ACOX3O15254 700 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 HDAC3O15379 428 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 USP12O75317 370 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 RECQL4O94761 1208 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 BTF3P20290 206 aaKnown RBP12.52□□□□□ -0.41
LITAF-221ENST00000622633 PKLRP30613 574 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 EVI2BP34910 448 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 HPCAL1P37235 193 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 STX1BP61266 288 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 IFRD2Q12894 506 aaPredicted RBP12.52□□□□□ -0.41
LITAF-221ENST00000622633 SLC25A52Q3SY17 297 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 C6orf132Q5T0Z8 1188 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 PID1Q7Z2X4 250 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 CHERPQ8IWX8 916 aaKnown RBP12.52□□□□□ -0.41
LITAF-221ENST00000622633 MINDY2Q8NBR6 621 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 UROC1Q96N76 676 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 ADAMTS10Q9H324 1103 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 THG1LQ9NWX6 298 aaKnown RBP12.52□□□□□ -0.41
LITAF-221ENST00000622633 DCAF16Q9NXF7 216 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 RIMKLBQ9ULI2 386 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 SORCS3Q9UPU3 1222 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 PCDHGB3Q9Y5G1 929 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 CITO14578 2027 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 COL1A2P08123 1366 aa12.52□□□□□ -0.41
LITAF-221ENST00000622633 KPNA7A9QM74 516 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.51□□□□□ -0.41
LITAF-221ENST00000622633 TK2O00142 265 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 CLDN5O00501 218 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 GIPC1O14908 333 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 RALBP11234 206 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 PCNAP12004 261 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 NCF2P19878 526 aaPredicted RBP12.51□□□□□ -0.41
LITAF-221ENST00000622633 RPL34P49207 117 aaKnown RBP12.51□□□□□ -0.41
LITAF-221ENST00000622633 EPHB1P54762 984 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 CDH15P55291 814 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 MAP3K7CLP57077 242 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 ECT2LQ008S8 904 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 ADIGQ0VDE8 80 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 NME3Q13232 169 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 FBXO47Q5MNV8 452 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 SLC27A1Q6PCB7 646 aa12.51□□□□□ -0.41
LITAF-221ENST00000622633 PGM2L1Q6PCE3 622 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms