RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 MFSD11O43934 449 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 LZTS3O60299 673 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 NDUFA10O95299 355 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 JUPP14923 745 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 HSPA9P38646 679 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 MMP13P45452 471 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 POLR2LP62875 67 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 DAB2P98082 770 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 MESDQ14696 234 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 PAFAH1B3Q15102 231 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 PDK2Q15119 407 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 MARC1Q5VT66 337 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 LIPIQ6XZB0 460 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 PAF1Q8N7H5 531 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 MDM1Q8TC05 714 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 LMX1AQ8TE12 382 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 APOLD1Q96LR9 279 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 ZNF670Q9BS34 389 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 CCDC86Q9H6F5 360 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 SCUBE2Q9NQ36 999 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 CSNK1G3Q9Y6M4 447 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 U3KQA8 63 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 PKD1L2Q7Z442 2459 aa18.05■□□□□ 0.48
SCAMP4-213ENST00000621748 CFAP69A5D8W1 941 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 SOWAHDA6NJG2 315 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 AQP9O43315 295 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 GCATO75600 419 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 MAP3K6O95382 1288 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 KRT7P08729 469 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 ALPPL2P10696 532 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 CKMT1AP12532 417 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 GM2AP17900 193 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 MAN1A1P33908 653 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 GARSP41250 739 aaKnown RBP18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 GALNT2Q10471 571 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 C1orf61Q13536 156 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 INPP5AQ14642 412 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 HES3Q5TGS1 186 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 MACC1Q6ZN28 852 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 NYAP1Q6ZVC0 841 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 DPPA4Q7L190 304 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 PROSER1Q86XN7 944 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 LRRC49Q8IUZ0 686 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 PHACTR4Q8IZ21 702 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 BBS5Q8N3I7 341 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 TEX26Q8N6G2 289 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 PQLC3Q8N755 202 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 FAM181AQ8N9Y4 354 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 NSMCE1Q8WV22 266 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 BTN2A2Q8WVV5 523 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 SPOCK2Q92563 424 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 RAPGEF5Q92565 580 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 FAF2Q96CS3 445 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 PDLIM2Q96JY6 352 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 APOOQ9BUR5 198 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 DUSP23Q9BVJ7 150 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 LCMT1Q9UIC8 334 aa18.04■□□□□ 0.48
SCAMP4-213ENST00000621748 CHD6Q8TD26 2715 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 SOCS5O75159 536 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 RECQL5O94762 991 aaPredicted RBP18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 PCCBP05166 539 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 ELFN1P0C7U0 828 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 PEX5P50542 639 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 INSM1Q01101 510 aaPredicted RBP18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 TRAF2Q12933 501 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 TARDBPQ13148 414 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 DEFB133Q30KQ1 61 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 PRRT3Q5FWE3 981 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 FAXCQ5TGI0 409 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 MAP7D3Q8IWC1 876 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 PDCD7Q8N8D1 485 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 PLA2G15Q8NCC3 412 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 PDCD6IPQ8WUM4 868 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 LRRN4Q8WUT4 740 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 LRRC61Q9BV99 259 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 NT5MQ9NPB1 228 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 B4GALT6Q9UBX8 382 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 APOBEC3BQ9UH17 382 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 OR1A2Q9Y585 309 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 DSPP15924 2871 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 RP1P56715 2156 aa18.03■□□□□ 0.48
SCAMP4-213ENST00000621748 URB1O60287 2271 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 LRP4O75096 1905 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 FECHP22830 423 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 KDELR1P24390 212 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 HNF1BP35680 557 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 PPARDQ03181 441 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 GBE1Q04446 702 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 CYP4F3Q08477 520 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 SLC10A2Q12908 348 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 PTPRRQ15256 657 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 RFFLQ8WZ73 363 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 MAML1Q92585 1016 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 TSACCQ96A04 125 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 TRIM44Q96DX7 344 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 SLC13A1Q9BZW2 595 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 CLPBQ9H078 707 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 SPASTQ9UBP0 616 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 INTUQ9ULD6 942 aa18.02■□□□□ 0.48
SCAMP4-213ENST00000621748 PCDHA13Q9Y5I0 950 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms