RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 DTNAQ9Y4J8 743 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 KCTD3Q9Y597 815 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PTGDR2Q9Y5Y4 395 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 HS3ST4Q9Y661 456 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PTCH2Q9Y6C5 1203 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 C7orf72A4D263 438 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 PRORSD1PA6NEY8 169 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 E7ENX8 843 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 J3KR12 359 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 TRIM24O15164 1050 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 VILLO15195 856 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 MATN3O15232 486 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 MTSS1O43312 755 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 DENRO43583 198 aaKnown RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 H2AFYO75367 372 aaKnown RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 BCAS2O75934 225 aaPredicted RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 POMCP01189 267 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 THP07101 528 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 FAM163BP0C2L3 166 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 HAPLN1P10915 354 aaPredicted RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 CPB1P15086 417 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 STMN1P16949 149 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 ZNF26P17031 533 aaPredicted RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 CCNCP24863 283 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 PMLP29590 882 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 LHX1P48742 406 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 GPR15P49685 360 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 CHN2P52757 468 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 SLC5A3P53794 718 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 WNT3AP56704 352 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 MRPS6P82932 125 aaKnown RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 XIAPP98170 497 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 MGAT3Q09327 533 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 MED21Q13503 144 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 LRP8Q14114 963 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 SEPT6Q14141 434 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 CSHL1Q14406 222 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 SEMA3AQ14563 771 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 PTPRCAPQ14761 206 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 HERC3Q15034 1050 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 ZRSR2Q15696 482 aaKnown RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 PCSK7Q16549 785 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 ARL13BQ3SXY8 428 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 PITRM1Q5JRX3 1037 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 SDHAF4Q5VUM1 108 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 IL23RQ5VWK5 629 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 NXNQ6DKJ4 435 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 IL31Q6EBC2 164 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 CLEC6AQ6EIG7 209 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 KIAA0930Q6ICG6 404 aaPredicted RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 HMBOX1Q6NT76 420 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 C8orf82Q6P1X6 216 aaPredicted RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 PDZD4Q76G19 769 aaPredicted RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 TMEM86AQ8N2M4 240 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 PGBD5Q8N414 524 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 ATPAF2Q8N5M1 289 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 GRIN3AQ8TCU5 1115 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 NAT14Q8WUY8 206 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 STON2Q8WXE9 905 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 IRGQQ8WZA9 623 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 PTERQ96BW5 349 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 TMA16Q96EY4 203 aaKnown RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 FCRL2Q96LA5 508 aaPredicted RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 UBXN10Q96LJ8 280 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 ZNF512Q96ME7 567 aaPredicted RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 NSMCE3Q96MG7 304 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 PRICKLE1Q96MT3 831 aaPredicted RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 GBP5Q96PP8 586 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 KLHL5Q96PQ7 755 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 BTBD9Q96Q07 612 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 TSPAN18Q96SJ8 248 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 SLC39A3Q9BRY0 314 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 CCDC28BQ9BUN5 200 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 SENP6Q9GZR1 1112 aaPredicted RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 FAM192AQ9GZU8 254 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 MRPL46Q9H2W6 279 aaKnown RBP4.34□□□□□ -1.71
SEC22B-202ENST00000618538 SMOC2Q9H3U7 446 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 GSTO2Q9H4Y5 243 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 CHST12Q9NRB3 414 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 CACNA2D2Q9NY47 1150 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 CLIC5Q9NZA1 410 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 TLK1Q9UKI8 766 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 IKZF3Q9UKT9 509 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 RNF11Q9Y3C5 154 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 AP4B1Q9Y6B7 739 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 DOCK4Q8N1I0 1966 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 MIA3Q5JRA6 1907 aa4.34□□□□□ -1.71
SEC22B-202ENST00000618538 C9JVG2 144 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 E9PAM4 449 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 PLOD2O00469 737 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 TXNDC9O14530 226 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 MUSKO15146 869 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 SLC22A2O15244 555 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 NPHS1O60500 1241 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 TADA2AO75478 443 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 CNTN5O94779 1100 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 SNUPNO95149 360 aaKnown RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 ZIC2O95409 532 aaPredicted RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 MOCS2O96007 188 aaPredicted RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 F9P00740 461 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms