RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 HOXB2P14652 356 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 TIMP2P16035 220 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 TSHRP16473 764 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 PGAM1P18669 254 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 ITGB7P26010 798 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 TARSP26639 723 aaKnown RBP8.1□□□□□ -1.11
TARDBP-219ENST00000617757 SSTR1P30872 391 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 HNF1BP35680 557 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 HSD17B3P37058 310 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 ABL2P42684 1182 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 METAP1P53582 386 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 ZXDAP98168 799 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 SATB1Q01826 763 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 LRRC32Q14392 662 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 UBXN2BQ14CS0 331 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 PTPRRQ15256 657 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 UGP2Q16851 508 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 EOGTQ5NDL2 527 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 CFAP58Q5T655 872 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 ARMC3Q5W041 872 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 STEAP4Q687X5 459 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 CASC4Q6P4E1 433 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 PKN3Q6P5Z2 889 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 BRAT1Q6PJG6 821 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 UNC5AQ6ZN44 842 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 PARS2Q7L3T8 475 aaKnown RBP8.1□□□□□ -1.11
TARDBP-219ENST00000617757 DSG4Q86SJ6 1040 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 TTC7BQ86TV6 843 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 TMEM135Q86UB9 458 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 NDUFAF2Q8N183 169 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 SIX5Q8N196 739 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 PAF1Q8N7H5 531 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 OR2T3Q8NH03 318 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 BLOC1S5Q8TDH9 187 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 PTCD2Q8WV60 388 aaKnown RBP8.1□□□□□ -1.11
TARDBP-219ENST00000617757 UBLCP1Q8WVY7 318 aaPredicted RBP8.1□□□□□ -1.11
TARDBP-219ENST00000617757 ERLEC1Q96DZ1 483 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 SCRN2Q96FV2 425 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 CFAP36Q96G28 342 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 ZNF778Q96MU6 729 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 TTC25Q96NG3 672 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 FCRL3Q96P31 734 aaPredicted RBP8.1□□□□□ -1.11
TARDBP-219ENST00000617757 NECAB3Q96P71 396 aaPredicted RBP8.1□□□□□ -1.11
TARDBP-219ENST00000617757 FOXQ1Q9C009 403 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 PLAC1Q9HBJ0 212 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 MRM3Q9HC36 420 aaKnown RBP8.1□□□□□ -1.11
TARDBP-219ENST00000617757 MAGEE1Q9HCI5 957 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 CD248Q9HCU0 757 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 HACD3Q9P035 362 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 SAMD15Q9P1V8 674 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 MAD1L1Q9Y6D9 718 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 RPS6KL1Q9Y6S9 549 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 EML5Q05BV3 1969 aa8.1□□□□□ -1.11
TARDBP-219ENST00000617757 DOCK9Q9BZ29 2069 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 MROH6A6NGR9 719 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 CAPN8A6NHC0 703 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 FAM170BA6NMN3 283 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 RNASEH1O60930 286 aaKnown RBP8.09□□□□□ -1.11
TARDBP-219ENST00000617757 USP1O94782 785 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 PAPSS2O95340 614 aaPredicted RBP8.09□□□□□ -1.11
TARDBP-219ENST00000617757 ACSL3O95573 720 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 CRTAMO95727 393 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 ADH1BP00325 375 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 POLBP06746 335 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 ABHD2P08910 425 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 GSTA2P09210 222 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 C7P10643 843 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 NFKBIAP25963 317 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 NMBRP28336 390 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 PHBP35232 272 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 PSMD8P48556 350 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 RPS14P62263 151 aaKnown RBP8.09□□□□□ -1.11
TARDBP-219ENST00000617757 LAMB3Q13751 1172 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 SEPT6Q14141 434 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 GAS6Q14393 721 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 SLC29A2Q14542 456 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 CASP8Q14790 479 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 CRYMQ14894 314 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 TAF1AQ15573 450 aaPredicted RBP8.09□□□□□ -1.11
TARDBP-219ENST00000617757 CST6Q15828 149 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 CDKN3Q16667 212 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 POM121L1PQ3SYA9 428 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 ANKRD20A4Q4UJ75 823 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 TJAP1Q5JTD0 557 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 SPANXN3Q5MJ09 141 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 TSTD2Q5T7W7 516 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 FAM46CQ5VWP2 391 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 ESRP1Q6NXG1 681 aaKnown RBP8.09□□□□□ -1.11
TARDBP-219ENST00000617757 CES3Q6UWW8 571 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 TMEM92Q6UXU6 159 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 Q6ZS52 159 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 CAPN12Q6ZSI9 719 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 C3orf62Q6ZUJ4 267 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 NLRP9Q7RTR0 991 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 GLT6D1Q7Z4J2 308 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 TMPRSS6Q8IU80 811 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 TTC30BQ8N4P2 665 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 GSDMBQ8TAX9 411 aa8.09□□□□□ -1.11
TARDBP-219ENST00000617757 ZNF669Q96BR6 464 aaPredicted RBP8.09□□□□□ -1.11
TARDBP-219ENST00000617757 MFSD3Q96ES6 412 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms