RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 YES1P07947 543 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 CES1P23141 567 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 AKAP5P24588 427 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 IGFBP5P24593 272 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ORC1Q13415 861 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ECM1Q16610 540 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 USP39Q53GS9 565 aaKnown RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 RALGPS1Q5JS13 557 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ANXA8L1Q5VT79 327 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 NEK5Q6P3R8 708 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ADAMTSL2Q86TH1 951 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 KRT78Q8N1N4 520 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 HTRA1Q92743 480 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 SMARCD1Q96GM5 515 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 SLC38A2Q96QD8 506 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ZNF112Q9UJU3 913 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 MKLN1Q9UL63 735 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 SAMHD1Q9Y3Z3 626 aaKnown RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 GNG14A0A1W2PPG7 69 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ITM2AO43736 263 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 RPLP0P05388 317 aaKnown RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 SNHG28P0DPA3 235 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ITIH1P19827 911 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 OGNP20774 298 aaKnown RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 RPS12P25398 132 aaKnown RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 HALP42357 657 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 PSMD4P55036 377 aaKnown RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 GMFBP60983 142 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 GNA13Q14344 377 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 PFKFB4Q16877 469 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 SPPL2CQ8IUH8 684 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ZC3H3Q8IXZ2 948 aaKnown RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 MKS1Q9NXB0 559 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 FBXO5Q9UKT4 447 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 PPM1HQ9ULR3 514 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 COQ4Q9Y3A0 265 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 IFT172Q9UG01 1749 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 CLPXO76031 633 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 NR2F6P10588 404 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 MOGSQ13724 837 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ACAP2Q15057 778 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 NAT8LQ8N9F0 302 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 GOLM1Q8NBJ4 401 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 TRPV1Q8NER1 839 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 C18orf25Q96B23 403 aaPredicted RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ATG4CQ96DT6 458 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 SPATA17Q96L03 361 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 CCDC177Q9NQR7 707 aaPredicted RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 DNAJB9Q9UBS3 223 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 DOLKQ9UPQ8 538 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 DCCP43146 1447 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 EME2A4GXA9 379 aaPredicted RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 E7ENX8 843 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 H3BN98 237 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ZNF701M0R085 212 aaPredicted RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 BCAS2O75934 225 aaPredicted RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 RAP2AP10114 183 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 TTPAP49638 278 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ADIGQ0VDE8 80 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 RFTN1Q14699 578 aaPredicted RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 SKIV2LQ15477 1246 aaKnown RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 NDUFAF6Q330K2 333 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 FBXO43Q4G163 708 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 DNAJB7Q7Z6W7 309 aaPredicted RBP10.3□□□□□ -0.76
CUL4A-212ENST00000617546 SYT12Q8IV01 421 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ZZZ3Q8IYH5 903 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 LINC00116Q8NCU8 138 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ZFP42Q96MM3 310 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 FBXO44Q9H4M3 255 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 ALG2Q9H553 416 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 PACSIN3Q9UKS6 424 aa10.3□□□□□ -0.76
CUL4A-212ENST00000617546 NPM3O75607 178 aaKnown RBP10.29□□□□□ -0.76
CUL4A-212ENST00000617546 ALDH1A1P00352 501 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 LSM3P62310 102 aaKnown RBP10.29□□□□□ -0.76
CUL4A-212ENST00000617546 COL9A3Q14050 684 aaPredicted RBP10.29□□□□□ -0.76
CUL4A-212ENST00000617546 C10orf120Q5SQS8 335 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 FAM131AQ6UXB0 335 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 TNS4Q8IZW8 715 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 CDYL2Q8N8U2 506 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 OR5K1Q8NHB7 308 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 POLR1EQ9GZS1 481 aaKnown RBP10.29□□□□□ -0.76
CUL4A-212ENST00000617546 NXF3Q9H4D5 531 aaKnown RBP10.29□□□□□ -0.76
CUL4A-212ENST00000617546 ADGRE2Q9UHX3 823 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 TNS2Q63HR2 1409 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 KCNK1O00180 336 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 AIREO43918 545 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 CREB1P16220 341 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 CHRNB2P17787 502 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 POLR2JP52435 117 aaKnown RBP10.29□□□□□ -0.76
CUL4A-212ENST00000617546 STX4Q12846 297 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 CYP2W1Q8TAV3 490 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 IRGQQ8WZA9 623 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 QRFPRQ96P65 431 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 WDR55Q9H6Y2 383 aaPredicted RBP10.29□□□□□ -0.76
CUL4A-212ENST00000617546 SEMA4BQ9NPR2 832 aaPredicted RBP10.29□□□□□ -0.76
CUL4A-212ENST00000617546 FAIMQ9NVQ4 179 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 CNOT6Q9ULM6 557 aaKnown RBP10.29□□□□□ -0.76
CUL4A-212ENST00000617546 DERAQ9Y315 318 aa10.29□□□□□ -0.76
CUL4A-212ENST00000617546 KCNU1A8MYU2 1149 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms