RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CHD7Q9P2D1 2997 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 NOL3O60936 208 aaKnown RBP22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 ERBB2P04626 1255 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 MSX2P35548 267 aaPredicted RBP22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 GALNT2Q10471 571 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 KCNT2Q6UVM3 1135 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 NAPRTQ6XQN6 538 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 TDHQ8IZJ6 230 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 UROC1Q96N76 676 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 CPXM1Q96SM3 734 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 TBCBQ99426 244 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 SLC29A1Q99808 456 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 BCO2Q9BYV7 579 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 SNX15Q9NRS6 342 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 TRNAU1APQ9NX07 287 aaKnown RBP22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 TIMM13Q9Y5L4 95 aaPredicted RBP22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 GBF1Q92538 1859 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 WDR27A2RRH5 827 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 TCAF2A6NFQ2 919 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 KPNA4O00629 521 aaPredicted RBP22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 CA3P07451 260 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 GSTT2P0CG29 244 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 GSTT2BP0CG30 244 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 RXRGP48443 463 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 PSME3P61289 254 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 TIGD5Q53EQ6 642 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 DCAF6Q58WW2 860 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 DEPDC1Q5TB30 811 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 MINDY2Q8NBR6 621 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 TCF12Q99081 682 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 ZNF670Q9BS34 389 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 IL22Q9GZX6 179 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 TRPC7Q9HCX4 862 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 ANLNQ9NQW6 1124 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 MARCH5Q9NX47 278 aa22.05■■□□□ 1.12
POLR2J3-220ENST00000613744 STAU1O95793 577 aaKnown RBP22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 IL4RP24394 825 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 PNPLA4P41247 253 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 MAPRE2Q15555 327 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 SV2CQ496J9 727 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 MTX3Q5HYI7 312 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 ANKRD26P1Q6NSI1 321 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 CLEC14AQ86T13 490 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 CCDC97Q96F63 343 aaPredicted RBP22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 B3GALT6Q96L58 329 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 HEPHQ9BQS7 1158 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 GATA5Q9BWX5 397 aaPredicted RBP22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 SEMA6AQ9H2E6 1030 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 CD320Q9NPF0 282 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 ARMC1Q9NVT9 282 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 TJP2Q9UDY2 1190 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 HMGXB4Q9UGU5 601 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 SUN2Q9UH99 717 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 YBX2Q9Y2T7 364 aaKnown RBP22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 CHD9Q3L8U1 2897 aa22.04■■□□□ 1.12
POLR2J3-220ENST00000613744 CFAP99D6REC4 459 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 BMP8BP34820 402 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 NSUN2Q08J23 767 aaKnown RBP eCLIP22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 PPM1JQ5JR12 505 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 SIX6OS1Q8N1H7 587 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 COLGALT1Q8NBJ5 622 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 PNPT1Q8TCS8 783 aaKnown RBP22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 CCDC138Q96M89 665 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 ZNF558Q96NG5 402 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 WDR55Q9H6Y2 383 aaPredicted RBP22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 OXSMQ9NWU1 459 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 SNX13Q9Y5W8 968 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 HEATR9A2RTY3 570 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 TRIM24O15164 1050 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 LINC00271P0C7V0 271 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 SPRP35270 261 aaPredicted RBP22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 NR2C2P49116 596 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 EIF2B2P49770 351 aaKnown RBP22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 BMXP51813 675 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 AARS2Q5JTZ9 985 aaKnown RBP22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 OLFML1Q6UWY5 402 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 CAMK1DQ8IU85 385 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 ZNF786Q8N393 782 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 RNF148Q8N7C7 305 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 SLCO4A1Q96BD0 722 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 SENP8Q96LD8 212 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 MRPL45Q9BRJ2 306 aaKnown RBP22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 TMEM175Q9BSA9 504 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 COLEC11Q9BWP8 271 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 PBX4Q9BYU1 374 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 C20orf96Q9NUD7 363 aaPredicted RBP22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 RIC8BQ9NVN3 520 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 ADA2Q9NZK5 511 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 PCDHGA7Q9Y5G6 932 aa22.03■■□□□ 1.12
POLR2J3-220ENST00000613744 LINC01553A4QN01 128 aa22.02■■□□□ 1.12
POLR2J3-220ENST00000613744 PLOD2O00469 737 aa22.02■■□□□ 1.12
POLR2J3-220ENST00000613744 GRID2O43424 1007 aa22.02■■□□□ 1.12
POLR2J3-220ENST00000613744 CSPG5O95196 566 aa22.02■■□□□ 1.12
POLR2J3-220ENST00000613744 STAMBPO95630 424 aa22.02■■□□□ 1.12
POLR2J3-220ENST00000613744 TMBIM6P55061 237 aa22.02■■□□□ 1.12
POLR2J3-220ENST00000613744 ZBTB17Q13105 803 aa22.02■■□□□ 1.12
POLR2J3-220ENST00000613744 STX5Q13190 355 aa22.02■■□□□ 1.12
POLR2J3-220ENST00000613744 FRG1Q14331 258 aaKnown RBP22.02■■□□□ 1.12
POLR2J3-220ENST00000613744 NR1D2Q14995 579 aa22.02■■□□□ 1.12
POLR2J3-220ENST00000613744 SPANXN3Q5MJ09 141 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms