RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 BATF3Q9NR55 127 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 FAM207AQ9NSI2 230 aaPredicted RBP7.22□□□□□ -1.25
CBWD1-219ENST00000611457 SMPD4Q9NXE4 827 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 REXO2Q9Y3B8 237 aaKnown RBP7.22□□□□□ -1.25
CBWD1-219ENST00000611457 PCDHGA7Q9Y5G6 932 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 R4GN57 208 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 ATG2BQ96BY7 2078 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 C5orf60A6NFR6 353 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 RNF8O76064 485 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 CYC1P08574 325 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 VAV2P52735 878 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 EIF3IQ13347 325 aaKnown RBP7.22□□□□□ -1.25
CBWD1-219ENST00000611457 LAMB3Q13751 1172 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 NFATC4Q14934 902 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 NAA25Q14CX7 972 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 DLG2Q15700 870 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.22□□□□□ -1.25
CBWD1-219ENST00000611457 PACS1Q6VY07 963 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 KLHDC8AQ8IYD2 350 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 SYCE1Q8N0S2 351 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 ZNF564Q8TBZ8 553 aaPredicted RBP7.22□□□□□ -1.25
CBWD1-219ENST00000611457 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.22□□□□□ -1.25
CBWD1-219ENST00000611457 MCEEQ96PE7 176 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 FCRL4Q96PJ5 515 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 SLC25A51Q9H1U9 297 aa7.22□□□□□ -1.25
CBWD1-219ENST00000611457 NHEJ1Q9H9Q4 299 aaPredicted RBP7.22□□□□□ -1.25
CBWD1-219ENST00000611457 DRG1Q9Y295 367 aaKnown RBP7.22□□□□□ -1.25
CBWD1-219ENST00000611457 TLR4O00206 839 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 EEF2KO00418 725 aaKnown RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 SCAMP1O15126 338 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 SOD1P00441 154 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 CD38P28907 300 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 GCKP35557 465 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 CTSOP43234 321 aaPredicted RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 DUSP3P51452 185 aaPredicted RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 RPL7AP62424 266 aaKnown RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 RELAQ04206 551 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 ACTN3Q08043 901 aaPredicted RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 MPP3Q13368 585 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 RAPGEF1Q13905 1077 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 LBRQ14739 615 aaKnown RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 NOMO1Q15155 1222 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 ALS2CLQ60I27 953 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 SERPINA13PQ6UXR4 307 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 CCDC121Q6ZUS5 278 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 PTCD2Q8WV60 388 aaKnown RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 CPLX3Q8WVH0 158 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 BIRC7Q96CA5 298 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 DTD2Q96FN9 168 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 RPRD1AQ96P16 312 aaPredicted RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 ELF4Q99607 663 aaPredicted RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 C11orf70Q9BRQ4 267 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 EDEM2Q9BV94 578 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 TDRD1Q9BXT4 1180 aaKnown RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 SLC39A8Q9C0K1 460 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 ATP13A3Q9H7F0 1226 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 EBF2Q9HAK2 575 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 TRNAU1APQ9NX07 287 aaKnown RBP7.21□□□□□ -1.25
CBWD1-219ENST00000611457 SAR1BQ9Y6B6 198 aa7.21□□□□□ -1.25
CBWD1-219ENST00000611457 hCG_1818297A0A087WSY0 165 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 DDX3YO15523 660 aaKnown RBP7.21□□□□□ -1.26
CBWD1-219ENST00000611457 GCATO75600 419 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 RARAP10276 462 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 PSMA2P25787 234 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 TFDP2Q14188 446 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 RBBP5Q15291 538 aaKnown RBP7.21□□□□□ -1.26
CBWD1-219ENST00000611457 HSP90AA4PQ58FG1 418 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 STK40Q8N2I9 435 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 NPWQ8N729 165 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 TTC13Q8NBP0 860 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 GPR156Q8NFN8 814 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 AENQ8WTP8 325 aaKnown RBP7.21□□□□□ -1.26
CBWD1-219ENST00000611457 CAVIN3Q969G5 261 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 ERLEC1Q96DZ1 483 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 TIMM29Q9BSF4 260 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 NUP85Q9BW27 656 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 NEUROG2Q9H2A3 272 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 SUV39H2Q9H5I1 410 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 RABEP2Q9H5N1 569 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 CDV3Q9UKY7 258 aaKnown RBP7.21□□□□□ -1.26
CBWD1-219ENST00000611457 ANKRD6Q9Y2G4 727 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 MN1Q10571 1320 aaPredicted RBP7.21□□□□□ -1.26
CBWD1-219ENST00000611457 APOC4-APOC2K7ER74 178 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 HEXIM1O94992 359 aaKnown RBP7.21□□□□□ -1.26
CBWD1-219ENST00000611457 APOC2P02655 101 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 KRT10P13645 584 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 ERCC2P18074 760 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 OR1E1P30953 314 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 CYLC1P35663 651 aaPredicted RBP7.21□□□□□ -1.26
CBWD1-219ENST00000611457 CD86P42081 329 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 RECQLP46063 649 aaPredicted RBP7.21□□□□□ -1.26
CBWD1-219ENST00000611457 RAD51Q06609 339 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 FGL2Q14314 439 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 GLE1Q53GS7 698 aaKnown RBP7.21□□□□□ -1.26
CBWD1-219ENST00000611457 HENMT1Q5T8I9 393 aaKnown RBP7.21□□□□□ -1.26
CBWD1-219ENST00000611457 RFWD3Q6PCD5 774 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 PARP9Q8IXQ6 854 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 RGL4Q8IZJ4 473 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 PGBD5Q8N414 524 aa7.21□□□□□ -1.26
CBWD1-219ENST00000611457 MREGQ8N565 214 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms