RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 SERAC1Q96JX3 654 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 MSLNLQ96KJ4 702 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 MAGEB18Q96M61 343 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 NSMCE3Q96MG7 304 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 IQCGQ9H095 443 aaKnown RBP12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 VPS11Q9H270 941 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ECT2Q9H8V3 914 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 IARS2Q9NSE4 1012 aaKnown RBP12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 INTS10Q9NVR2 710 aaKnown RBP12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 DCDC2Q9UHG0 476 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 FBXO5Q9UKT4 447 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PHTF1Q9UMS5 762 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 ANKRD6Q9Y2G4 727 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PCDHGC4Q9Y5F7 938 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 PSAT1Q9Y617 370 aa12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 TCF20Q9UGU0 1960 aaKnown RBP12.34□□□□□ -0.43
NEDD8-MDP1-203ENST00000604306 A0A0J9YYE9 177 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 GMNCA6NCL1 334 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CAPN8A6NHC0 703 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 RFXAPO00287 272 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PFDN6O15212 129 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 LINC01565O15544 149 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 UGT1A9O60656 530 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TULP3O75386 442 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 GJB3O75712 270 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 FAM107AO95990 144 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TRBC1P01850 177 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ALDOAP04075 364 aaKnown RBP12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PYGBP11216 843 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PSMC3P17980 439 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 VIPR2P41587 438 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ETV4P43268 484 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 RECQLP46063 649 aaPredicted RBP12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CD151P48509 253 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 EPHB1P54762 984 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 POLR2LP62875 67 aaKnown RBP12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 POU4F1Q01851 419 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PDK4Q16654 411 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TYSND1Q2T9J0 566 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 GAB4Q2WGN9 574 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MYLK3Q32MK0 819 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 RNF187Q5TA31 235 aaPredicted RBP12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MROH9Q5TGP6 573 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ZDHHC20Q5W0Z9 365 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ZNF470Q6ECI4 717 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 GRAMD4Q6IC98 578 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 FSTL4Q6MZW2 842 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 BRAT1Q6PJG6 821 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 VITQ6UXI7 678 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 KDELC2Q7Z4H8 507 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CILP2Q8IUL8 1156 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CBARPQ8N350 705 aaPredicted RBP12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TTC30BQ8N4P2 665 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 BLOC1S5Q8TDH9 187 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 DYDC1Q8WWB3 177 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MRRFQ96E11 262 aaKnown RBP12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CHMP6Q96FZ7 201 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MRGPRX3Q96LB0 322 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MCCC1Q96RQ3 725 aaPredicted RBP12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 AGAP2Q99490 1192 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 NSRP1Q9H0G5 558 aaKnown RBP12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 UGT1A7Q9HAW7 530 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 UGT1A10Q9HAW8 530 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 UGT1A8Q9HAW9 530 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 DEC1Q9P2X7 70 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 EPS15L1Q9UBC2 864 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SLC2A6Q9UGQ3 507 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 GRID1Q9ULK0 1009 aa12.33□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 K7ERQ8 282 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 KLF11O14901 512 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 NPC1O15118 1278 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 BIRC5O15392 142 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TBX10O75333 385 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PIAS1O75925 651 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 IL1BP01584 269 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 APOA4P06727 396 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 PDHA1P08559 390 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 LAMP2P13473 410 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CD9P21926 228 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CRABP2P29373 138 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 RPA3P35244 121 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SLC26A3P40879 764 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SLC1A2P43004 574 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CCNHP51946 323 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 WDR4P57081 412 aaKnown RBP12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MPP2Q14168 576 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 DLG2Q15700 870 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ZKSCAN8Q15776 578 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SEPT7Q16181 437 aaKnown RBP12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 CCDC153Q494R4 210 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 AARS2Q5JTZ9 985 aaKnown RBP12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 ATXN7L2Q5T6C5 722 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 NUDT18Q6ZVK8 323 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 TRIM42Q8IWZ5 723 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MICALL1Q8N3F8 863 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 SMRP1Q8NCR6 262 aa12.32□□□□□ -0.44
NEDD8-MDP1-203ENST00000604306 MDM1Q8TC05 714 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms