RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 NFS1Q9Y697 457 aa11.12□□□□□ -0.63
ZNF558-207ENST00000601372 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 ALBP02768 609 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 ATP6V1B2P21281 511 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 CRABP2P29373 138 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 PLA2G4EQ3MJ16 856 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 IRAK1BP1Q5VVH5 260 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 ZBTB49Q6ZSB9 765 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 CLNKQ7Z7G1 428 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 P2RY11Q96G91 374 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 AGO3Q9H9G7 860 aaKnown RBP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 WDR41Q9HAD4 459 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 ZMYM5Q9UJ78 669 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 RASSF9O75901 435 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 IL1R2P27930 398 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 GABRB2P47870 512 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 TEAD4Q15561 434 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 CA9Q16790 459 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 C11orf74Q86VG3 221 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 SYTL1Q8IYJ3 562 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 DQX1Q8TE96 717 aaKnown RBP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 LZICQ8WZA0 190 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 LRRC39Q96DD0 335 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 ACOX2Q99424 681 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 CATSPERZQ9NTU4 200 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 LGALS13Q9UHV8 139 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 SLCO1B7G3V0H7 640 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 SERPINA6P08185 405 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 DAB2P98082 770 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 SNAP47Q5SQN1 464 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 WLSQ5T9L3 541 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 TXNDC8Q6A555 127 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 CENPLQ8N0S6 344 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 FUBP3Q96I24 572 aaKnown RBP eCLIP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 NLNQ9BYT8 704 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 GRIP2Q9C0E4 1043 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 LRMDAQ9H2I8 198 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 MMADHCQ9H3L0 296 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 ASB8Q9H765 288 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 SEMA4BQ9NPR2 832 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 VTI1BQ9UEU0 232 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 A0A1B0GUL6 1792 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 ZNF839A8K0R7 811 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 GSC2O15499 205 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 FAM58BPP0C7Q3 252 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 HNRNPLP14866 589 aaKnown RBP eCLIP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 ERCC2P18074 760 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 MTHFRP42898 656 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 SCARA3Q6AZY7 606 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 MPP5Q8N3R9 675 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 AZIN2Q96A70 460 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 GJD2Q9UKL4 321 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 PIRTP0C851 137 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 BMPR1AP36894 532 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 NAGLUP54802 743 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 SIKE1Q9BRV8 207 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 WRAP53Q9BUR4 548 aaKnown RBP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 A0A087X1B8 175 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 TBX18O95935 607 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 EIF2B5Q13144 721 aaKnown RBP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 TRIP4Q15650 581 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-207ENST00000601372 IRGCQ6NXR0 463 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 SLC22A9Q8IVM8 553 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 CSPG4P5Q96PW8 444 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 VAT1Q99536 393 aa11.11□□□□□ -0.63
ZNF558-207ENST00000601372 LY75O60449 1722 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 BPGMP07738 259 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 DHPSP49366 369 aaPredicted RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 NAB1Q13506 487 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 AASDHQ4L235 1098 aaPredicted RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 BORCS6Q96GS4 357 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 RPL10LQ96L21 214 aaKnown RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 CROTQ9UKG9 612 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 PCDHGC3Q9UN70 934 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 CHKBQ9Y259 395 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 PSMD12O00232 456 aaPredicted RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 CFIP05156 583 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 MAT2AP31153 395 aaKnown RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 DMC1Q14565 340 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 TAC4Q86UU9 113 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 DHFR2Q86XF0 187 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 FIG4Q92562 907 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 ABHD8Q96I13 439 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 NSUN3Q9H649 340 aaKnown RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 ELAC1Q9H777 363 aaKnown RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 EVLQ9UI08 416 aaPredicted RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 SLC12A4Q9UP95 1085 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 MRASO14807 208 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 CCNT2O60583 730 aaKnown RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 CCDC166P0CW27 439 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 TPBGLP0DKB5 382 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 KCNE1P15382 129 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 ZC3H3Q8IXZ2 948 aaKnown RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 ELMO1Q92556 727 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 NPAS2Q99743 824 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 IL22Q9GZX6 179 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 DOCK2Q92608 1830 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 UGT2B4P06133 528 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 MPSTP25325 297 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms