RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZDHHC6Q9H6R6 413 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 BRD9Q9H8M2 597 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 ZFATQ9P243 1243 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 PLA2G4CQ9UP65 541 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 TMEM120BA0PK00 339 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.25■□□□□ 0.03
VRK3-207ENST00000594092 WASH3PC4AMC7 463 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 KRT37O76014 449 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 VAPBO95292 243 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 CREB1P16220 341 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 EPHB1P54762 984 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 RPL26P61254 145 aaKnown RBP15.25■□□□□ 0.03
VRK3-207ENST00000594092 ST8SIA6P61647 398 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 RAD51Q06609 339 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 LAMB3Q13751 1172 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 AAK1Q2M2I8 961 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 TEDDM1Q5T9Z0 273 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 PRPF38BQ5VTL8 546 aaKnown RBP15.25■□□□□ 0.03
VRK3-207ENST00000594092 MDGA1Q8NFP4 955 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 OR13J1Q8NGT2 312 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 MZB1Q8WU39 189 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 CENPTQ96BT3 561 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 AGAP2Q99490 1192 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 MTG2Q9H4K7 406 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 INTS9Q9NV88 658 aaKnown RBP15.25■□□□□ 0.03
VRK3-207ENST00000594092 RPL26L1Q9UNX3 145 aaKnown RBP15.25■□□□□ 0.03
VRK3-207ENST00000594092 SLC8A2Q9UPR5 921 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 PSAT1Q9Y617 370 aa15.25■□□□□ 0.03
VRK3-207ENST00000594092 TBC1D3BA6NDS4 549 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 GOLGA8TH3BQL2 631 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 AURKAO14965 403 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 CRTAMO95727 393 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 PAMP19021 973 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 LSP1P33241 339 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 RECQLP46063 649 aaPredicted RBP15.24■□□□□ 0.03
VRK3-207ENST00000594092 GRIA4P48058 902 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 SERPINB9P50453 376 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 GRM3Q14832 879 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 PTPRRQ15256 657 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 TAF1AQ15573 450 aaPredicted RBP15.24■□□□□ 0.03
VRK3-207ENST00000594092 ZSWIM9Q86XI8 627 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 CNPY4Q8N129 248 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 KDM1BQ8NB78 822 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 SUV39H2Q9H5I1 410 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 IARS2Q9NSE4 1012 aaKnown RBP15.24■□□□□ 0.03
VRK3-207ENST00000594092 RIMKLBQ9ULI2 386 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 A0A1W2PPM1 405 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 BUD23O43709 281 aaKnown RBP15.24■□□□□ 0.03
VRK3-207ENST00000594092 KRT38O76015 456 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 KAT7O95251 611 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 MT-ND3P03897 115 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 SNRPAP09012 282 aaKnown RBP15.24■□□□□ 0.03
VRK3-207ENST00000594092 CTPS1P17812 591 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 ABL2P42684 1182 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 SOX9P48436 509 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 ACVR1Q04771 509 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 PTPRCAPQ14761 206 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 PACS1Q6VY07 963 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 MICALCLQ6ZW33 695 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 GLT6D1Q7Z4J2 308 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 ZNF366Q8N895 744 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 PPM1EQ8WY54 764 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 PTPRN2Q92932 1015 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 PEX13Q92968 403 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 ECHDC3Q96DC8 303 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 MTBPQ96DY7 904 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 DNAJC1Q96KC8 554 aaKnown RBP15.24■□□□□ 0.03
VRK3-207ENST00000594092 ZNF641Q96N77 438 aaPredicted RBP15.24■□□□□ 0.03
VRK3-207ENST00000594092 HEPHQ9BQS7 1158 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 SSU72Q9NP77 194 aaKnown RBP15.24■□□□□ 0.03
VRK3-207ENST00000594092 NKIRAS1Q9NYS0 192 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 SMG5Q9UPR3 1016 aaKnown RBP15.24■□□□□ 0.03
VRK3-207ENST00000594092 WASF2Q9Y6W5 498 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 PRUNE2Q8WUY3 3088 aa15.24■□□□□ 0.03
VRK3-207ENST00000594092 MUC22E2RYF6 1773 aaPredicted RBP15.23■□□□□ 0.03
VRK3-207ENST00000594092 FAM47DPA6NHR8 397 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 CCL22O00626 93 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 PRPF4O43172 522 aaKnown RBP eCLIP15.23■□□□□ 0.03
VRK3-207ENST00000594092 UGT2B4P06133 528 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 KRT4P19013 534 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 CNTFP26441 200 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 GRIA2P42262 883 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 ARSDP51689 593 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 ZNF140P52738 457 aaPredicted RBP15.23■□□□□ 0.03
VRK3-207ENST00000594092 FNDC3BQ53EP0 1204 aaKnown RBP15.23■□□□□ 0.03
VRK3-207ENST00000594092 CNTN4Q8IWV2 1026 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 C4orf33Q8N1A6 199 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 PAF1Q8N7H5 531 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 ANKRD42Q8N9B4 389 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 OR13C4Q8NGS5 318 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 CSGALNACT1Q8TDX6 532 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 STYXQ8WUJ0 223 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 ALKBH8Q96BT7 664 aaKnown RBP15.23■□□□□ 0.03
VRK3-207ENST00000594092 CPNE1Q99829 537 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 MAGEE1Q9HCI5 957 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 HACD3Q9P035 362 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 TXNDC16Q9P2K2 825 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 GGT7Q9UJ14 662 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 TICRRQ7Z2Z1 1910 aa15.23■□□□□ 0.03
VRK3-207ENST00000594092 BPTFQ12830 3046 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms